Insufficient scRNA-seq data for expression of LRFN3 at single-cell level.
Insufficient scRNA-seq data for expression of LRFN3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1175.74 | 245 / 245 | 99% | 13.19 | 498 / 502 |
brain | 100% | 932.13 | 2631 / 2642 | 100% | 16.71 | 702 / 705 |
ovary | 100% | 1618.05 | 180 / 180 | 99% | 19.28 | 426 / 430 |
esophagus | 100% | 977.67 | 1445 / 1445 | 99% | 21.85 | 181 / 183 |
breast | 100% | 991.34 | 459 / 459 | 98% | 13.39 | 1096 / 1118 |
pancreas | 100% | 643.59 | 328 / 328 | 98% | 13.04 | 174 / 178 |
thymus | 100% | 951.96 | 653 / 653 | 97% | 8.91 | 589 / 605 |
intestine | 100% | 925.65 | 966 / 966 | 97% | 12.71 | 513 / 527 |
adrenal gland | 100% | 935.52 | 258 / 258 | 97% | 13.72 | 223 / 230 |
bladder | 100% | 1075.52 | 21 / 21 | 97% | 13.76 | 487 / 504 |
stomach | 100% | 783.62 | 358 / 359 | 97% | 14.91 | 276 / 286 |
skin | 100% | 938.03 | 1808 / 1809 | 96% | 13.35 | 451 / 472 |
uterus | 100% | 1561.72 | 170 / 170 | 95% | 13.31 | 438 / 459 |
lung | 100% | 773.35 | 576 / 578 | 96% | 12.68 | 1106 / 1155 |
liver | 100% | 589.91 | 225 / 226 | 90% | 7.92 | 366 / 406 |
kidney | 100% | 800.11 | 89 / 89 | 83% | 6.73 | 747 / 901 |
adipose | 100% | 873.86 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 15.27 | 80 / 80 |
spleen | 100% | 774.58 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.34 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.18 | 1 / 1 |
blood vessel | 100% | 1239.57 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 690.76 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 586.26 | 854 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 3.88 | 21 / 29 |
peripheral blood | 42% | 133.69 | 387 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099179 | Biological process | regulation of synaptic membrane adhesion |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0048787 | Cellular component | presynaptic active zone membrane |
GO_0009986 | Cellular component | cell surface |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0030424 | Cellular component | axon |
GO_0005886 | Cellular component | plasma membrane |
GO_0030425 | Cellular component | dendrite |
Gene name | LRFN3 |
Protein name | Leucine-rich repeat and fibronectin type-III domain-containing protein 3 (Synaptic adhesion-like molecule 4) |
Synonyms | SALM4 UNQ5865/PRO34192 |
Description | FUNCTION: Cell adhesion molecule that mediates homophilic cell-cell adhesion in a Ca(2+)-independent manner. Promotes neurite outgrowth in hippocampal neurons (By similarity). . |
Accessions | ENST00000588831.5 Q9BTN0 ENST00000246529.4 |