LMX1A report

I. Expression across cell types

Insufficient scRNA-seq data for expression of LMX1A at single-cell level.

II. Expression across tissues

sc-RNAseq data

Insufficient scRNA-seq data for expression of LMX1A at tissue level.

III. Associated gene sets

GO_0001558Biological processregulation of cell growth
GO_1904948Biological processmidbrain dopaminergic neuron differentiation
GO_0006357Biological processregulation of transcription by RNA polymerase II
GO_0021542Biological processdentate gyrus development
GO_0021953Biological processcentral nervous system neuron differentiation
GO_0071542Biological processdopaminergic neuron differentiation
GO_0030182Biological processneuron differentiation
GO_0045665Biological processnegative regulation of neuron differentiation
GO_0042048Biological processolfactory behavior
GO_0021549Biological processcerebellum development
GO_0007613Biological processmemory
GO_0050808Biological processsynapse organization
GO_0007626Biological processlocomotory behavior
GO_0007411Biological processaxon guidance
GO_0045944Biological processpositive regulation of transcription by RNA polymerase II
GO_0000785Cellular componentchromatin
GO_0005634Cellular componentnucleus
GO_0001228Molecular functionDNA-binding transcription activator activity, RNA polymerase II-specific
GO_0000977Molecular functionRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO_0000981Molecular functionDNA-binding transcription factor activity, RNA polymerase II-specific
GO_1990837Molecular functionsequence-specific double-stranded DNA binding
GO_0046872Molecular functionmetal ion binding
GO_0005515Molecular functionprotein binding

IV. Literature review

[source]
Gene nameLMX1A
Protein nameLIM homeobox transcription factor 1-alpha (LIM/homeobox protein 1.1) (LMX-1.1) (LIM/homeobox protein LMX1A)
LIM homeobox transcription factor 1, alpha
SynonymshCG_21707
DescriptionFUNCTION: Acts as a transcriptional activator by binding to an A/T-rich sequence, the FLAT element, in the insulin gene promoter. Required for development of the roof plate and, in turn, for specification of dorsal cell fates in the CNS and developing vertebrae (By similarity). .

AccessionsENST00000294816.6 [Q8TE12-1]
ENST00000342310.7 [Q8TE12-1]
ENST00000367893.4 [Q8TE12-1]
Q8TE12
Q6NZ39