Insufficient scRNA-seq data for expression of LHX5 at single-cell level.
Insufficient scRNA-seq data for expression of LHX5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 35% | 86.24 | 923 / 2642 | 43% | 4.17 | 301 / 705 |
stomach | 74% | 127.06 | 267 / 359 | 3% | 0.11 | 8 / 286 |
esophagus | 0% | 0.03 | 2 / 1445 | 32% | 1.43 | 59 / 183 |
lung | 0% | 0.03 | 1 / 578 | 30% | 1.37 | 344 / 1155 |
bladder | 0% | 0 | 0 / 21 | 26% | 0.92 | 132 / 504 |
uterus | 0% | 0 | 0 / 170 | 25% | 1.01 | 115 / 459 |
tonsil | 0% | 0 | 0 / 0 | 22% | 0.87 | 10 / 45 |
adrenal gland | 2% | 0.55 | 6 / 258 | 10% | 1.55 | 23 / 230 |
pancreas | 0% | 0 | 0 / 328 | 9% | 1.95 | 16 / 178 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.11 | 2 / 29 |
intestine | 0% | 0.30 | 1 / 966 | 5% | 0.10 | 26 / 527 |
breast | 0% | 0 | 0 / 459 | 2% | 0.07 | 21 / 1118 |
skin | 1% | 0.32 | 26 / 1809 | 0% | 0.00 | 1 / 472 |
kidney | 1% | 0.42 | 1 / 89 | 0% | 0.01 | 4 / 901 |
thymus | 1% | 0.25 | 9 / 653 | 0% | 0.02 | 1 / 605 |
liver | 0% | 0.09 | 1 / 226 | 1% | 0.02 | 4 / 406 |
prostate | 0% | 0.09 | 1 / 245 | 1% | 0.04 | 3 / 502 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.15 | 3 / 430 |
adipose | 0% | 0.14 | 5 / 1204 | 0% | 0 | 0 / 0 |
spleen | 0% | 0.07 | 1 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.18 | 5 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.08 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1902692 | Biological process | regulation of neuroblast proliferation |
GO_0030182 | Biological process | neuron differentiation |
GO_0021766 | Biological process | hippocampus development |
GO_0021527 | Biological process | spinal cord association neuron differentiation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0007405 | Biological process | neuroblast proliferation |
GO_0021702 | Biological process | cerebellar Purkinje cell differentiation |
GO_0021846 | Biological process | cell proliferation in forebrain |
GO_0021937 | Biological process | cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation |
GO_0021879 | Biological process | forebrain neuron differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | LHX5 |
Protein name | LIM/homeobox protein Lhx5 (LIM homeobox protein 5) |
Synonyms | |
Description | FUNCTION: Plays an essential role in the regulation of neuronal differentiation and migration during development of the central nervous system. |
Accessions | ENST00000261731.4 Q9H2C1 |