Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 11 studies | 21% ± 5% | |
oligodendrocyte | 10 studies | 34% ± 14% | |
naive B cell | 8 studies | 20% ± 2% | |
memory B cell | 6 studies | 19% ± 3% | |
precursor B cell | 4 studies | 38% ± 5% | |
epithelial cell | 4 studies | 28% ± 8% | |
ciliated cell | 4 studies | 22% ± 3% | |
basal cell | 4 studies | 22% ± 5% | |
GABAergic neuron | 4 studies | 38% ± 15% | |
astrocyte | 4 studies | 30% ± 6% | |
pro-B cell | 3 studies | 22% ± 2% | |
glutamatergic neuron | 3 studies | 54% ± 13% | |
hepatocyte | 3 studies | 27% ± 9% | |
interneuron | 3 studies | 36% ± 20% | |
abnormal cell | 3 studies | 21% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 39% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6934.57 | 2642 / 2642 | 100% | 57.92 | 704 / 705 |
thymus | 100% | 2544.72 | 651 / 653 | 100% | 54.57 | 603 / 605 |
adrenal gland | 100% | 2239.72 | 257 / 258 | 97% | 18.45 | 223 / 230 |
intestine | 100% | 1707.62 | 962 / 966 | 97% | 16.13 | 509 / 527 |
prostate | 97% | 1145.74 | 238 / 245 | 99% | 16.92 | 497 / 502 |
uterus | 97% | 1267.19 | 165 / 170 | 98% | 20.11 | 452 / 459 |
liver | 100% | 2239.50 | 225 / 226 | 96% | 28.77 | 389 / 406 |
breast | 96% | 1013.42 | 441 / 459 | 98% | 20.37 | 1098 / 1118 |
esophagus | 98% | 1273.23 | 1409 / 1445 | 97% | 16.10 | 177 / 183 |
kidney | 99% | 1752.60 | 88 / 89 | 91% | 18.21 | 824 / 901 |
stomach | 95% | 1195.64 | 342 / 359 | 94% | 16.67 | 270 / 286 |
bladder | 86% | 1026.05 | 18 / 21 | 96% | 17.84 | 483 / 504 |
lung | 76% | 645.71 | 440 / 578 | 98% | 18.82 | 1130 / 1155 |
ovary | 69% | 553.85 | 124 / 180 | 100% | 25.53 | 429 / 430 |
skin | 86% | 826.69 | 1558 / 1809 | 78% | 8.96 | 368 / 472 |
pancreas | 17% | 109.41 | 57 / 328 | 97% | 17.09 | 173 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 21.60 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.81 | 29 / 29 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.11 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.13 | 1 / 1 |
spleen | 98% | 1116.12 | 237 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 95% | 1043.66 | 1273 / 1335 | 0% | 0 | 0 / 0 |
adipose | 88% | 820.89 | 1064 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 79% | 777.59 | 730 / 929 | 0% | 0 | 0 / 0 |
heart | 60% | 524.33 | 519 / 861 | 0% | 0 | 0 / 0 |
muscle | 30% | 211.46 | 243 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006796 | Biological process | phosphate-containing compound metabolic process |
GO_0016607 | Cellular component | nuclear speck |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0016791 | Molecular function | phosphatase activity |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0004427 | Molecular function | inorganic diphosphate phosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | LHPP |
Protein name | Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (EC 3.6.1.1) Phospholysine phosphohistidine inorganic pyrophosphate phosphatase (hLHPP) (EC 3.1.3.-) (EC 3.6.1.1) |
Synonyms | |
Description | FUNCTION: Phosphatase that hydrolyzes imidodiphosphate, 3-phosphohistidine and 6-phospholysine. Has broad substrate specificity and can also hydrolyze inorganic diphosphate, but with lower efficiency (By similarity). . FUNCTION: Phosphatase that hydrolyzes imidodiphosphate, 3-phosphohistidine and 6-phospholysine. Has broad substrate specificity and can also hydrolyze inorganic diphosphate, but with lower efficiency. . |
Accessions | ENST00000368839.1 [Q9H008-2] ENST00000368842.10 [Q9H008-1] Q5T1Z0 ENST00000392757.8 Q9H008 |