Name | Number of supported studies | Average coverage | |
---|---|---|---|
basal cell | 9 studies | 49% ± 19% | |
ciliated cell | 6 studies | 33% ± 12% | |
secretory cell | 6 studies | 51% ± 14% | |
epithelial cell | 5 studies | 53% ± 16% | |
respiratory goblet cell | 4 studies | 22% ± 8% | |
squamous epithelial cell | 3 studies | 56% ± 8% | |
placental villous trophoblast | 3 studies | 76% ± 9% | |
luminal cell of prostate epithelium | 3 studies | 23% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 80% | 1766.95 | 196 / 245 | 38% | 8.86 | 193 / 502 |
breast | 54% | 1420.70 | 247 / 459 | 63% | 57.88 | 702 / 1118 |
bladder | 29% | 248.62 | 6 / 21 | 61% | 111.27 | 305 / 504 |
pancreas | 10% | 113.71 | 34 / 328 | 71% | 46.14 | 126 / 178 |
skin | 72% | 8285.97 | 1309 / 1809 | 6% | 2.42 | 29 / 472 |
ovary | 0% | 0 | 0 / 180 | 73% | 36.61 | 313 / 430 |
peripheral blood | 68% | 2612.56 | 636 / 929 | 0% | 0 | 0 / 0 |
intestine | 0% | 0 | 0 / 966 | 56% | 56.76 | 297 / 527 |
uterus | 3% | 55.69 | 5 / 170 | 52% | 50.58 | 238 / 459 |
esophagus | 12% | 129.34 | 174 / 1445 | 42% | 25.92 | 77 / 183 |
liver | 2% | 18.42 | 4 / 226 | 43% | 45.99 | 174 / 406 |
stomach | 0% | 0 | 0 / 359 | 44% | 41.38 | 127 / 286 |
tonsil | 0% | 0 | 0 / 0 | 33% | 11.38 | 15 / 45 |
lung | 5% | 37.59 | 30 / 578 | 22% | 16.14 | 259 / 1155 |
spleen | 15% | 94.98 | 35 / 241 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 5% | 4.31 | 43 / 901 |
adipose | 2% | 18.60 | 21 / 1204 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 1% | 0.68 | 5 / 605 |
muscle | 0% | 3.33 | 2 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 1.91 | 1 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 4.13 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045109 | Biological process | intermediate filament organization |
GO_0030855 | Biological process | epithelial cell differentiation |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005882 | Cellular component | intermediate filament |
GO_0005515 | Molecular function | protein binding |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | KRT23 |
Protein name | Keratin 23 (Histone deacetylase inducible) Keratin 23 (Keratin, type I cytoskeletal 23) Keratin, type I cytoskeletal 23 (Cytokeratin-23) (CK-23) (Keratin-23) (K23) |
Synonyms | DKFZp434G032 |
Description | |
Accessions | ENST00000584517.1 ENST00000572233.1 K7EPI0 Q8TC04 ENST00000574395.5 ENST00000209718.8 [Q9C075-1] ENST00000485751.1 ENST00000436344.7 [Q9C075-2] ENST00000494691.5 J3QR55 ENST00000581268.1 ENST00000571258.6 [Q9C075-2] ENST00000462312.5 Q9UFN7 ENST00000571504.5 ENST00000574480.5 [Q9C075-1] Q9C075 |