Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 17 studies | 32% ± 11% | |
oligodendrocyte precursor cell | 13 studies | 39% ± 15% | |
glutamatergic neuron | 12 studies | 55% ± 22% | |
astrocyte | 12 studies | 30% ± 12% | |
oligodendrocyte | 12 studies | 30% ± 10% | |
GABAergic neuron | 10 studies | 49% ± 23% | |
neuron | 8 studies | 37% ± 12% | |
amacrine cell | 7 studies | 38% ± 14% | |
interneuron | 7 studies | 53% ± 22% | |
endothelial cell | 6 studies | 32% ± 13% | |
retinal ganglion cell | 6 studies | 58% ± 26% | |
retina horizontal cell | 6 studies | 55% ± 14% | |
retinal cone cell | 6 studies | 32% ± 11% | |
retinal rod cell | 6 studies | 26% ± 3% | |
granule cell | 4 studies | 29% ± 6% | |
retinal bipolar neuron | 3 studies | 24% ± 6% | |
GABAergic interneuron | 3 studies | 41% ± 8% | |
epithelial cell | 3 studies | 24% ± 6% | |
Mueller cell | 3 studies | 21% ± 2% | |
OFF-bipolar cell | 3 studies | 34% ± 18% | |
ON-bipolar cell | 3 studies | 36% ± 20% | |
glycinergic amacrine cell | 3 studies | 27% ± 8% | |
rod bipolar cell | 3 studies | 21% ± 3% | |
ependymal cell | 3 studies | 36% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4692.65 | 2641 / 2642 | 100% | 40.20 | 703 / 705 |
adrenal gland | 98% | 1110.15 | 254 / 258 | 99% | 28.79 | 227 / 230 |
thymus | 99% | 976.28 | 647 / 653 | 97% | 10.81 | 589 / 605 |
prostate | 99% | 1034.28 | 242 / 245 | 96% | 9.49 | 483 / 502 |
esophagus | 92% | 805.44 | 1332 / 1445 | 98% | 8.83 | 179 / 183 |
uterus | 100% | 1375.58 | 170 / 170 | 90% | 7.32 | 412 / 459 |
skin | 97% | 845.21 | 1749 / 1809 | 92% | 11.53 | 432 / 472 |
kidney | 93% | 774.73 | 83 / 89 | 94% | 9.18 | 851 / 901 |
breast | 90% | 807.29 | 411 / 459 | 97% | 14.04 | 1090 / 1118 |
lung | 92% | 811.91 | 530 / 578 | 95% | 7.81 | 1097 / 1155 |
ovary | 100% | 1284.40 | 180 / 180 | 87% | 5.57 | 372 / 430 |
bladder | 100% | 967.48 | 21 / 21 | 86% | 6.59 | 435 / 504 |
intestine | 84% | 807.21 | 815 / 966 | 83% | 5.39 | 437 / 527 |
stomach | 69% | 514.34 | 246 / 359 | 90% | 6.06 | 256 / 286 |
pancreas | 51% | 290.94 | 168 / 328 | 94% | 8.85 | 167 / 178 |
blood vessel | 97% | 893.17 | 1290 / 1335 | 0% | 0 | 0 / 0 |
spleen | 88% | 537.39 | 211 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 5.10 | 38 / 45 |
adipose | 80% | 570.27 | 969 / 1204 | 0% | 0 | 0 / 0 |
heart | 79% | 572.62 | 683 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 5.55 | 21 / 29 |
eye | 0% | 0 | 0 / 0 | 60% | 4.51 | 48 / 80 |
muscle | 36% | 201.05 | 290 / 803 | 0% | 0 | 0 / 0 |
liver | 4% | 22.73 | 10 / 226 | 27% | 1.54 | 110 / 406 |
peripheral blood | 20% | 932.67 | 184 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060271 | Biological process | cilium assembly |
GO_0072383 | Biological process | plus-end-directed vesicle transport along microtubule |
GO_0008089 | Biological process | anterograde axonal transport |
GO_0010457 | Biological process | centriole-centriole cohesion |
GO_1902414 | Biological process | protein localization to cell junction |
GO_0006996 | Biological process | organelle organization |
GO_0015031 | Biological process | protein transport |
GO_0034454 | Biological process | microtubule anchoring at centrosome |
GO_0005876 | Cellular component | spindle microtubule |
GO_0005874 | Cellular component | microtubule |
GO_0005813 | Cellular component | centrosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005871 | Cellular component | kinesin complex |
GO_0016939 | Cellular component | kinesin II complex |
GO_0005814 | Cellular component | centriole |
GO_0097542 | Cellular component | ciliary tip |
GO_0005929 | Cellular component | cilium |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0008574 | Molecular function | plus-end-directed microtubule motor activity |
GO_0030507 | Molecular function | spectrin binding |
GO_0019903 | Molecular function | protein phosphatase binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0003777 | Molecular function | microtubule motor activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | KIF3A |
Protein name | Kinesin family member 3A Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A) Kinesin-like protein |
Synonyms | KIF3 |
Description | FUNCTION: Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro. Plays a role in primary cilia formation. Plays a role in centriole cohesion and subdistal appendage organization and function. Regulates the formation of the subdistal appendage via recruitment of DCTN1 to the centriole. Also required for ciliary basal feet formation and microtubule anchoring to mother centriole. . |
Accessions | ENST00000378735.5 H7C2F6 Q05CT3 ENST00000618515.4 ENST00000450441.5 ENST00000378746.8 Q8IWH8 Q9Y496 ENST00000403231.6 ENST00000428744.1 Q2UVF2 A0A087X011 C9J9X2 J3KPF9 E9PES4 |