Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 12 studies | 37% ± 14% | |
oligodendrocyte | 7 studies | 36% ± 13% | |
endothelial cell | 6 studies | 20% ± 2% | |
retinal cone cell | 6 studies | 26% ± 8% | |
astrocyte | 6 studies | 35% ± 14% | |
endothelial cell of lymphatic vessel | 5 studies | 21% ± 5% | |
epithelial cell | 4 studies | 31% ± 11% | |
retinal rod cell | 4 studies | 27% ± 3% | |
glutamatergic neuron | 4 studies | 49% ± 15% | |
macrophage | 4 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 46% ± 8% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 7% | |
monocyte | 3 studies | 17% ± 2% | |
interneuron | 3 studies | 37% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1935.92 | 1445 / 1445 | 100% | 11.76 | 183 / 183 |
prostate | 100% | 3034.91 | 245 / 245 | 100% | 16.87 | 502 / 502 |
brain | 100% | 1410.85 | 2631 / 2642 | 100% | 14.04 | 703 / 705 |
breast | 100% | 1891.28 | 459 / 459 | 99% | 16.65 | 1109 / 1118 |
skin | 100% | 2401.31 | 1809 / 1809 | 99% | 16.42 | 468 / 472 |
thymus | 100% | 5590.35 | 653 / 653 | 99% | 15.67 | 597 / 605 |
bladder | 100% | 1678.24 | 21 / 21 | 98% | 8.67 | 495 / 504 |
pancreas | 100% | 1684.94 | 328 / 328 | 98% | 10.37 | 174 / 178 |
intestine | 100% | 1952.49 | 966 / 966 | 98% | 9.33 | 515 / 527 |
stomach | 100% | 1822.81 | 359 / 359 | 97% | 9.66 | 278 / 286 |
lung | 100% | 2058.02 | 578 / 578 | 97% | 9.53 | 1118 / 1155 |
kidney | 100% | 2295.16 | 89 / 89 | 97% | 9.81 | 871 / 901 |
uterus | 100% | 2183.45 | 170 / 170 | 96% | 8.85 | 442 / 459 |
ovary | 100% | 1566.66 | 180 / 180 | 95% | 9.19 | 408 / 430 |
adrenal gland | 100% | 1498.03 | 258 / 258 | 92% | 7.06 | 212 / 230 |
liver | 94% | 668.11 | 212 / 226 | 53% | 3.41 | 216 / 406 |
adipose | 100% | 1405.33 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2046.95 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.94 | 1 / 1 |
blood vessel | 100% | 1418.15 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 8.65 | 78 / 80 |
heart | 96% | 1073.54 | 828 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 8.63 | 43 / 45 |
peripheral blood | 95% | 1309.99 | 878 / 929 | 0% | 0 | 0 / 0 |
muscle | 80% | 551.31 | 643 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 79% | 4.98 | 23 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090660 | Biological process | cerebrospinal fluid circulation |
GO_0042995 | Cellular component | cell projection |
GO_0005615 | Cellular component | extracellular space |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
Gene name | KATNIP |
Protein name | Katanin-interacting protein Alternative protein KIAA0556 Katanin interacting protein |
Synonyms | KIAA0556 |
Description | FUNCTION: May influence the stability of microtubules (MT), possibly through interaction with the MT-severing katanin complex. . |
Accessions | ENST00000618117.1 O60303 ENST00000568258.5 H3BPM2 L8ECF8 A0A087X098 ENST00000565672.5 ENST00000261588.10 H3BNJ6 |