IFT22 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	57% ± 19%	Explore
fibroblast	5 studies	28% ± 11%	Explore
deuterosomal cell	4 studies	39% ± 9%	Explore
epithelial cell	4 studies	39% ± 7%	Explore
retinal rod cell	4 studies	31% ± 14%	Explore
connective tissue cell	3 studies	23% ± 4%	Explore
epithelial cell of proximal tubule	3 studies	20% ± 4%	Explore
retinal cone cell	3 studies	62% ± 17%	Explore
basal cell	3 studies	42% ± 11%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	4 studies	29% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	1031.84	180 / 180	100%	21.32	430 / 430
prostate	100%	1062.43	245 / 245	100%	14.02	501 / 502
thymus	100%	1419.23	653 / 653	100%	19.41	603 / 605
brain	100%	1205.16	2637 / 2642	100%	16.05	704 / 705
breast	100%	811.61	459 / 459	99%	15.38	1109 / 1118
skin	100%	722.58	1803 / 1809	98%	10.16	464 / 472
kidney	100%	1668.88	89 / 89	97%	16.00	878 / 901
pancreas	99%	562.79	325 / 328	98%	10.03	174 / 178
bladder	100%	947.14	21 / 21	97%	8.39	488 / 504
adrenal gland	100%	1128.96	258 / 258	97%	9.69	222 / 230
lung	99%	758.97	570 / 578	98%	10.03	1130 / 1155
uterus	100%	1049.77	170 / 170	96%	11.13	441 / 459
stomach	99%	683.68	356 / 359	95%	6.83	273 / 286
intestine	97%	837.97	937 / 966	95%	6.94	502 / 527
esophagus	99%	803.70	1430 / 1445	90%	7.45	164 / 183
liver	71%	213.85	161 / 226	59%	4.05	238 / 406
eye	0%	0	0 / 0	100%	11.20	80 / 80
tonsil	0%	0	0 / 0	100%	8.08	45 / 45
ureter	0%	0	0 / 0	100%	4.16	1 / 1
adipose	100%	666.52	1203 / 1204	0%	0	0 / 0
muscle	100%	803.11	802 / 803	0%	0	0 / 0
blood vessel	100%	791.86	1331 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	6.74	28 / 29
heart	95%	803.94	820 / 861	0%	0	0 / 0
spleen	92%	258.16	222 / 241	0%	0	0 / 0
peripheral blood	20%	109.67	185 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0