Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 12 studies | 29% ± 10% | |
| endothelial cell | 8 studies | 22% ± 7% | |
| astrocyte | 6 studies | 28% ± 9% | |
| epithelial cell | 4 studies | 21% ± 4% | |
| endothelial cell of lymphatic vessel | 4 studies | 22% ± 4% | |
| fibroblast | 3 studies | 36% ± 13% | |
| GABAergic neuron | 3 studies | 36% ± 5% | |
| glutamatergic neuron | 3 studies | 56% ± 10% | |
| ependymal cell | 3 studies | 39% ± 12% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 33% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 3185.60 | 459 / 459 | 100% | 23.07 | 1115 / 1118 |
| thymus | 100% | 3556.63 | 653 / 653 | 100% | 16.12 | 603 / 605 |
| prostate | 100% | 2457.76 | 245 / 245 | 100% | 10.39 | 500 / 502 |
| ovary | 100% | 4321.46 | 180 / 180 | 100% | 16.88 | 428 / 430 |
| uterus | 100% | 3258.36 | 170 / 170 | 99% | 14.24 | 455 / 459 |
| brain | 99% | 2187.25 | 2611 / 2642 | 100% | 12.59 | 705 / 705 |
| pancreas | 100% | 1781.41 | 328 / 328 | 98% | 10.91 | 175 / 178 |
| skin | 100% | 2223.84 | 1807 / 1809 | 98% | 10.21 | 464 / 472 |
| esophagus | 100% | 1721.82 | 1445 / 1445 | 98% | 10.38 | 179 / 183 |
| stomach | 100% | 1797.07 | 359 / 359 | 98% | 7.72 | 279 / 286 |
| lung | 100% | 2535.75 | 577 / 578 | 97% | 10.35 | 1126 / 1155 |
| kidney | 100% | 2597.42 | 89 / 89 | 97% | 17.06 | 873 / 901 |
| intestine | 100% | 1854.92 | 966 / 966 | 97% | 8.20 | 510 / 527 |
| adrenal gland | 100% | 1741.53 | 258 / 258 | 95% | 8.25 | 219 / 230 |
| bladder | 100% | 1834.38 | 21 / 21 | 95% | 7.99 | 479 / 504 |
| liver | 99% | 902.15 | 224 / 226 | 79% | 5.11 | 322 / 406 |
| adipose | 100% | 2739.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 13.16 | 80 / 80 |
| spleen | 100% | 1690.98 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 14.65 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 4.55 | 1 / 1 |
| blood vessel | 100% | 1893.45 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| heart | 97% | 1872.18 | 839 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 6.91 | 28 / 29 |
| peripheral blood | 72% | 582.19 | 670 / 929 | 0% | 0 | 0 / 0 |
| muscle | 72% | 492.11 | 579 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_1905515 | Biological process | non-motile cilium assembly |
| GO_0060271 | Biological process | cilium assembly |
| GO_0061512 | Biological process | protein localization to cilium |
| GO_0048593 | Biological process | camera-type eye morphogenesis |
| GO_0010172 | Biological process | embryonic body morphogenesis |
| GO_0060173 | Biological process | limb development |
| GO_0035721 | Biological process | intraciliary retrograde transport |
| GO_0045879 | Biological process | negative regulation of smoothened signaling pathway |
| GO_0060971 | Biological process | embryonic heart tube left/right pattern formation |
| GO_0035115 | Biological process | embryonic forelimb morphogenesis |
| GO_0035556 | Biological process | intracellular signal transduction |
| GO_0035050 | Biological process | embryonic heart tube development |
| GO_0001843 | Biological process | neural tube closure |
| GO_0035720 | Biological process | intraciliary anterograde transport |
| GO_0042073 | Biological process | intraciliary transport |
| GO_0021513 | Biological process | spinal cord dorsal/ventral patterning |
| GO_0072594 | Biological process | establishment of protein localization to organelle |
| GO_0032391 | Cellular component | photoreceptor connecting cilium |
| GO_0016020 | Cellular component | membrane |
| GO_0097542 | Cellular component | ciliary tip |
| GO_0030991 | Cellular component | intraciliary transport particle A |
| GO_0097730 | Cellular component | non-motile cilium |
| GO_0005929 | Cellular component | cilium |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0036064 | Cellular component | ciliary basal body |
| GO_0005515 | Molecular function | protein binding |
| Gene name | IFT122 |
| Protein name | Intraflagellar transport protein 122 homolog (WD repeat-containing protein 10) (WD repeat-containing protein 140) Alternative protein IFT122 Intraflagellar transport 122 Intraflagellar transport protein 122 homolog |
| Synonyms | WDR140 hCG_19939 SPG WDR10 |
| Description | FUNCTION: As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is required in ciliogenesis and ciliary protein trafficking . Involved in cilia formation during neuronal patterning. Acts as a negative regulator of Shh signaling. Required to recruit TULP3 to primary cilia (By similarity). . |
| Accessions | ENST00000686375.1 A0A8C8L0T3 D6RIB5 ENST00000691641.1 H0Y9Q2 A0A8I5KW25 ENST00000690663.1 ENST00000688527.1 ENST00000691360.1 ENST00000685447.1 ENST00000689871.1 ENST00000512220.5 ENST00000685189.1 A0A8I5QJE0 H0YAG6 A0A8I5KT76 ENST00000689643.1 A0A8I5KP73 ENST00000693162.1 A0A8I5KW32 A0A8I5KUV2 A0A8I5KZ03 A0A8I5KYX1 ENST00000509195.5 A0A8I5QKR8 A0A8I5KYR0 A0A8I5KTI2 A0A8I5KPB4 ENST00000690209.1 ENST00000431818.8 ENST00000690657.1 H0YAG9 A0A8I5KQ16 ENST00000440957.7 ENST00000686531.1 ENST00000685282.1 ENST00000691770.1 ENST00000502304.5 A0A8I5KX14 ENST00000691733.1 ENST00000689796.1 ENST00000509522.6 ENST00000507221.2 ENST00000349441.6 [Q9HBG6-4] ENST00000687845.1 ENST00000690723.1 ENST00000348417.7 [Q9HBG6-1] ENST00000692228.1 ENST00000512157.6 A0A8I5KUY3 A0A8I5KT78 A0A8I5KXT5 ENST00000688657.1 A0A8I5KXA7 ENST00000689492.1 ENST00000685921.1 A0A8I5KR03 ENST00000693489.1 A0A8I5KS91 L8E937 ENST00000685939.1 A0A8I5KUK8 ENST00000686473.1 H0Y9Y9 A0A8I5KX44 A0A8I5KS77 A0A8I5KR07 A0A8I5QKV6 ENST00000504021.6 ENST00000347300.6 [Q9HBG6-3] ENST00000690862.1 ENST00000685122.1 ENST00000689332.1 ENST00000688664.1 ENST00000687791.1 ENST00000296266.7 [Q9HBG6-5] A0A8I5KV39 A0A8I5QL25 A0A8I5KTT9 ENST00000687377.1 A0A8I5KXC8 H0Y978 ENST00000687645.1 ENST00000687766.1 Q9HBG6 ENST00000515783.6 A0A8I5KSQ0 A0A8I5KSV0 ENST00000507564.5 [Q9HBG6-6] ENST00000685087.1 A0A8I5KUU2 ENST00000691705.1 ENST00000688129.1 ENST00000693114.1 A0A8I5KSG5 A0A8I5KYB6 A0A8I5KRP5 A0A8I5QKV2 ENST00000692728.1 ENST00000686830.1 A0A8I5QJX4 A0A8I5KQF6 A0A8I5QKJ5 ENST00000692901.1 D6RAF7 ENST00000502456.5 ENST00000693588.1 A0A8J9A3C6 A0A8I5KT04 ENST00000693233.1 [Q9HBG6-7] A0A8I5KYT5 A0A8I5KNX7 ENST00000691583.1 ENST00000692321.1 A0A8I5KVC7 ENST00000690677.1 ENST00000689801.1 A0A8I5QKY6 A0A8I5QKX8 ENST00000692242.1 ENST00000692985.1 ENST00000689005.1 [Q9HBG6-10] ENST00000691964.1 ENST00000692391.1 A0A8I5KWK4 H0Y9I6 ENST00000689313.1 ENST00000693129.1 A0A8I5QL12 A0A8I5KTL4 A0A8I5KSN5 ENST00000688020.1 ENST00000687398.1 |
