Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 22% ± 5% | |
oligodendrocyte | 7 studies | 31% ± 8% | |
epithelial cell | 6 studies | 30% ± 11% | |
endothelial cell of lymphatic vessel | 6 studies | 22% ± 4% | |
astrocyte | 6 studies | 28% ± 9% | |
macrophage | 6 studies | 23% ± 5% | |
adipocyte | 5 studies | 21% ± 3% | |
GABAergic neuron | 4 studies | 42% ± 16% | |
glutamatergic neuron | 4 studies | 49% ± 18% | |
microglial cell | 4 studies | 24% ± 5% | |
oligodendrocyte precursor cell | 4 studies | 34% ± 8% | |
interneuron | 4 studies | 36% ± 21% | |
fibroblast | 3 studies | 20% ± 3% | |
ciliated cell | 3 studies | 25% ± 5% | |
transit amplifying cell | 3 studies | 29% ± 16% | |
neuron | 3 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1859.43 | 1445 / 1445 | 100% | 9.69 | 183 / 183 |
brain | 100% | 1380.93 | 2639 / 2642 | 100% | 8.43 | 705 / 705 |
prostate | 100% | 2311.08 | 245 / 245 | 100% | 10.47 | 501 / 502 |
breast | 100% | 2346.94 | 459 / 459 | 100% | 11.38 | 1114 / 1118 |
lung | 100% | 1746.85 | 577 / 578 | 100% | 8.42 | 1152 / 1155 |
thymus | 100% | 2615.47 | 653 / 653 | 99% | 9.31 | 601 / 605 |
uterus | 100% | 2560.06 | 170 / 170 | 99% | 7.77 | 455 / 459 |
ovary | 100% | 2944.23 | 180 / 180 | 99% | 6.53 | 426 / 430 |
kidney | 100% | 1801.81 | 89 / 89 | 98% | 7.50 | 884 / 901 |
pancreas | 100% | 1181.88 | 327 / 328 | 98% | 6.32 | 175 / 178 |
stomach | 100% | 1596.89 | 359 / 359 | 98% | 7.39 | 280 / 286 |
intestine | 100% | 2030.45 | 966 / 966 | 97% | 7.00 | 513 / 527 |
bladder | 100% | 2143.43 | 21 / 21 | 97% | 6.85 | 490 / 504 |
adrenal gland | 100% | 2015.37 | 258 / 258 | 95% | 6.17 | 218 / 230 |
skin | 100% | 1990.24 | 1809 / 1809 | 90% | 7.19 | 425 / 472 |
liver | 100% | 978.71 | 226 / 226 | 81% | 3.78 | 330 / 406 |
adipose | 100% | 2372.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1868.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.89 | 29 / 29 |
spleen | 100% | 2115.33 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.97 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.74 | 1 / 1 |
muscle | 100% | 1231.67 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1142.08 | 845 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 78% | 4.78 | 62 / 80 |
peripheral blood | 62% | 978.89 | 572 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042795 | Biological process | snRNA transcription by RNA polymerase II |
GO_0045945 | Biological process | positive regulation of transcription by RNA polymerase III |
GO_0042796 | Biological process | snRNA transcription by RNA polymerase III |
GO_0015030 | Cellular component | Cajal body |
GO_0000791 | Cellular component | euchromatin |
GO_0035363 | Cellular component | histone locus body |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0008023 | Cellular component | transcription elongation factor complex |
GO_0005515 | Molecular function | protein binding |
Gene name | ICE2 |
Protein name | Interactor of little elongation complex ELL subunit 2 Little elongation complex subunit 2 (Interactor of little elongator complex ELL subunit 2) (NMDA receptor-regulated protein 2) |
Synonyms | NARG2 BRCC1 UNQ3101/PRO10100 |
Description | FUNCTION: Component of the little elongation complex (LEC), a complex required to regulate small nuclear RNA (snRNA) gene transcription by RNA polymerase II and III. . |
Accessions | ENST00000261520.9 [Q659A1-1] ENST00000561114.5 H0YK96 ENST00000560520.1 ENST00000560895.5 ENST00000560668.5 [Q659A1-2] ENST00000560072.5 H0YMX6 Q659A1 ENST00000558512.5 H0YNU9 ENST00000561446.5 H0YN09 H0YK97 H0YL35 ENST00000560406.5 H0YK14 ENST00000558181.5 [Q659A1-2] |