HTR3C | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of HTR3C at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	98%	223.60	565 / 578	4%	0.22	48 / 1155
thymus	77%	10.40	504 / 653	1%	0.10	8 / 605
prostate	58%	7.20	141 / 245	3%	0.21	14 / 502
intestine	51%	8.65	493 / 966	5%	0.25	27 / 527
breast	42%	3.44	192 / 459	0%	0.00	3 / 1118
adipose	39%	3.00	465 / 1204	0%	0	0 / 0
stomach	33%	1.87	118 / 359	6%	0.10	16 / 286
uterus	29%	1.85	50 / 170	1%	0.02	4 / 459
ovary	23%	1.39	41 / 180	3%	0.39	13 / 430
esophagus	22%	1.35	317 / 1445	4%	0.14	7 / 183
pancreas	7%	0.35	24 / 328	16%	0.54	29 / 178
bladder	19%	0.76	4 / 21	4%	0.43	22 / 504
skin	19%	1.29	339 / 1809	3%	0.05	12 / 472
kidney	20%	0.90	18 / 89	0%	0.01	3 / 901
adrenal gland	19%	0.88	50 / 258	0%	0	0 / 230
blood vessel	9%	0.64	114 / 1335	0%	0	0 / 0
spleen	5%	0.31	11 / 241	0%	0	0 / 0
brain	4%	0.19	107 / 2642	0%	0	0 / 705
liver	3%	0.12	6 / 226	0%	0.02	2 / 406
heart	3%	0.46	27 / 861	0%	0	0 / 0
muscle	3%	0.15	23 / 803	0%	0	0 / 0
peripheral blood	2%	0.07	17 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0034220	Biological process	monoatomic ion transmembrane transport
GO_0042391	Biological process	regulation of membrane potential
GO_0007268	Biological process	chemical synaptic transmission
GO_0007210	Biological process	serotonin receptor signaling pathway
GO_0098662	Biological process	inorganic cation transmembrane transport
GO_0060079	Biological process	excitatory postsynaptic potential
GO_1902495	Cellular component	transmembrane transporter complex
GO_0045211	Cellular component	postsynaptic membrane
GO_1904602	Cellular component	serotonin-activated cation-selective channel complex
GO_0045202	Cellular component	synapse
GO_0005886	Cellular component	plasma membrane
GO_0043005	Cellular component	neuron projection
GO_0005231	Molecular function	excitatory extracellular ligand-gated monoatomic ion channel activity
GO_1904315	Molecular function	transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO_0022850	Molecular function	serotonin-gated monoatomic cation channel activity
GO_0005515	Molecular function	protein binding

Gene name	HTR3C
Protein name	5-hydroxytryptamine receptor 3C (5-HT3-C) (5-HT3C) (Serotonin receptor 3C)
Synonyms
Description	FUNCTION: Forms serotonin (5-hydroxytryptamine/5-HT3)-activated cation-selective channel complexes, which when activated cause fast, depolarizing responses in neurons. .
Accessions	Q8WXA8 ENST00000318351.2

HTR3C report