Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 15 studies | 40% ± 18% | |
oligodendrocyte | 12 studies | 36% ± 13% | |
smooth muscle cell | 11 studies | 36% ± 21% | |
endothelial cell | 7 studies | 28% ± 14% | |
kidney loop of Henle epithelial cell | 5 studies | 45% ± 4% | |
fibroblast | 5 studies | 33% ± 13% | |
basal cell | 5 studies | 24% ± 4% | |
endothelial cell of vascular tree | 4 studies | 38% ± 21% | |
keratinocyte | 3 studies | 22% ± 6% | |
goblet cell | 3 studies | 31% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 89% | 7941.83 | 2344 / 2642 | 96% | 67.94 | 674 / 705 |
skin | 87% | 3487.08 | 1577 / 1809 | 90% | 63.84 | 423 / 472 |
esophagus | 99% | 8883.98 | 1430 / 1445 | 58% | 22.15 | 106 / 183 |
uterus | 73% | 3698.92 | 124 / 170 | 79% | 45.31 | 363 / 459 |
intestine | 93% | 8536.14 | 903 / 966 | 50% | 10.87 | 266 / 527 |
kidney | 83% | 3356.18 | 74 / 89 | 49% | 9.17 | 445 / 901 |
bladder | 76% | 5820.14 | 16 / 21 | 49% | 11.28 | 247 / 504 |
lung | 80% | 1822.30 | 464 / 578 | 40% | 9.89 | 467 / 1155 |
breast | 24% | 389.08 | 108 / 459 | 80% | 33.60 | 889 / 1118 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.69 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 78.50 | 79 / 80 |
blood vessel | 93% | 2958.79 | 1245 / 1335 | 0% | 0 | 0 / 0 |
muscle | 92% | 7575.51 | 742 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 80.76 | 41 / 45 |
spleen | 87% | 2739.80 | 209 / 241 | 0% | 0 | 0 / 0 |
stomach | 43% | 1888.60 | 156 / 359 | 42% | 11.10 | 119 / 286 |
ovary | 22% | 377.58 | 39 / 180 | 62% | 10.71 | 265 / 430 |
pancreas | 11% | 162.41 | 36 / 328 | 69% | 14.71 | 122 / 178 |
prostate | 42% | 1231.86 | 102 / 245 | 28% | 3.09 | 140 / 502 |
heart | 65% | 2254.73 | 558 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 27% | 474.25 | 69 / 258 | 36% | 7.51 | 82 / 230 |
adipose | 44% | 833.01 | 531 / 1204 | 0% | 0 | 0 / 0 |
liver | 3% | 51.96 | 7 / 226 | 19% | 2.56 | 79 / 406 |
thymus | 2% | 23.58 | 10 / 653 | 15% | 7.28 | 92 / 605 |
peripheral blood | 0% | 1.87 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090084 | Biological process | negative regulation of inclusion body assembly |
GO_0006986 | Biological process | response to unfolded protein |
GO_0009408 | Biological process | response to heat |
GO_0007283 | Biological process | spermatogenesis |
GO_0010971 | Biological process | positive regulation of G2/M transition of mitotic cell cycle |
GO_0007286 | Biological process | spermatid development |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0007141 | Biological process | male meiosis I |
GO_0009409 | Biological process | response to cold |
GO_0042026 | Biological process | protein refolding |
GO_0070194 | Biological process | synaptonemal complex disassembly |
GO_0051085 | Biological process | chaperone cofactor-dependent protein refolding |
GO_0007140 | Biological process | male meiotic nuclear division |
GO_0000795 | Cellular component | synaptonemal complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0036128 | Cellular component | CatSper complex |
GO_0072562 | Cellular component | blood microparticle |
GO_0009986 | Cellular component | cell surface |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0072687 | Cellular component | meiotic spindle |
GO_0001673 | Cellular component | male germ cell nucleus |
GO_0005634 | Cellular component | nucleus |
GO_0019899 | Molecular function | enzyme binding |
GO_0051861 | Molecular function | glycolipid binding |
GO_0044183 | Molecular function | protein folding chaperone |
GO_0031072 | Molecular function | heat shock protein binding |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0051087 | Molecular function | protein-folding chaperone binding |
GO_0140662 | Molecular function | ATP-dependent protein folding chaperone |
GO_0005524 | Molecular function | ATP binding |
GO_0048156 | Molecular function | tau protein binding |
GO_0097718 | Molecular function | disordered domain specific binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | HSPA2 |
Protein name | Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2) |
Synonyms | |
Description | FUNCTION: Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The affinity for polypeptides is regulated by its nucleotide bound state. In the ATP-bound form, it has a low affinity for substrate proteins. However, upon hydrolysis of the ATP to ADP, it undergoes a conformational change that increases its affinity for substrate proteins. It goes through repeated cycles of ATP hydrolysis and nucleotide exchange, which permits cycles of substrate binding and release . Plays a role in spermatogenesis. In association with SHCBP1L may participate in the maintenance of spindle integrity during meiosis in male germ cells (By similarity). . |
Accessions | ENST00000394709.2 P54652 ENST00000247207.7 |