Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| microglial cell | 8 studies | 29% ± 11% | |
| macrophage | 7 studies | 21% ± 5% | |
| oligodendrocyte | 4 studies | 18% ± 1% | |
| GABAergic neuron | 3 studies | 28% ± 6% | |
| glutamatergic neuron | 3 studies | 33% ± 9% | |
| oligodendrocyte precursor cell | 3 studies | 23% ± 6% | |
| dendritic cell | 3 studies | 27% ± 4% | |
| plasmacytoid dendritic cell | 3 studies | 21% ± 5% | |
| astrocyte | 3 studies | 26% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 26% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 823.16 | 1442 / 1445 | 100% | 22.19 | 183 / 183 |
| ovary | 100% | 1362.68 | 180 / 180 | 100% | 17.12 | 429 / 430 |
| stomach | 100% | 1003.69 | 359 / 359 | 99% | 15.97 | 284 / 286 |
| lung | 100% | 1188.40 | 577 / 578 | 99% | 19.17 | 1148 / 1155 |
| intestine | 100% | 1231.62 | 965 / 966 | 99% | 13.20 | 520 / 527 |
| breast | 100% | 1243.59 | 459 / 459 | 98% | 19.29 | 1097 / 1118 |
| skin | 100% | 1204.12 | 1805 / 1809 | 97% | 21.54 | 460 / 472 |
| pancreas | 99% | 754.56 | 324 / 328 | 98% | 12.13 | 174 / 178 |
| bladder | 100% | 1253.00 | 21 / 21 | 96% | 13.48 | 483 / 504 |
| kidney | 100% | 1198.88 | 89 / 89 | 95% | 19.41 | 859 / 901 |
| brain | 97% | 557.14 | 2556 / 2642 | 98% | 11.12 | 692 / 705 |
| uterus | 100% | 1605.56 | 170 / 170 | 95% | 14.02 | 435 / 459 |
| thymus | 100% | 1338.89 | 653 / 653 | 94% | 11.57 | 570 / 605 |
| prostate | 100% | 1023.18 | 244 / 245 | 93% | 10.95 | 468 / 502 |
| adrenal gland | 100% | 1611.07 | 257 / 258 | 80% | 7.53 | 185 / 230 |
| liver | 91% | 320.71 | 205 / 226 | 73% | 6.80 | 298 / 406 |
| adipose | 100% | 1332.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1815.34 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1307.42 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 96% | 1048.98 | 894 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 15.90 | 43 / 45 |
| heart | 92% | 454.40 | 795 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 83% | 13.73 | 24 / 29 |
| muscle | 81% | 284.79 | 653 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 78% | 6.76 | 62 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0046907 | Biological process | intracellular transport |
| GO_0060155 | Biological process | platelet dense granule organization |
| GO_0006996 | Biological process | organelle organization |
| GO_1903232 | Biological process | melanosome assembly |
| GO_0031084 | Cellular component | BLOC-2 complex |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005769 | Cellular component | early endosome |
| GO_0005515 | Molecular function | protein binding |
| Gene name | HPS3 |
| Protein name | Hermansky-Pudlak syndrome 3 protein homolog HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 BLOC-2 complex member HPS3 (Hermansky-Pudlak syndrome 3 protein) Alternative protein HPS3 |
| Synonyms | hCG_1787015 |
| Description | FUNCTION: Involved in early stages of melanosome biogenesis and maturation. . FUNCTION: Involved in early stages of melanosome biogenesis and maturation. . |
| Accessions | ENST00000460822.1 H7C5G2 G5E9V4 ENST00000460120.5 ENST00000296051.7 [Q969F9-1] Q969F9 L8ECL2 L8EBA6 |
