Insufficient scRNA-seq data for expression of HOXB8 at single-cell level.
Insufficient scRNA-seq data for expression of HOXB8 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 1686.71 | 89 / 89 | 63% | 16.82 | 568 / 901 |
intestine | 90% | 279.73 | 873 / 966 | 72% | 46.81 | 382 / 527 |
adrenal gland | 100% | 487.93 | 258 / 258 | 60% | 21.04 | 137 / 230 |
bladder | 86% | 115.76 | 18 / 21 | 49% | 21.81 | 249 / 504 |
uterus | 89% | 125.35 | 152 / 170 | 39% | 22.41 | 177 / 459 |
stomach | 72% | 445.09 | 258 / 359 | 48% | 20.64 | 138 / 286 |
breast | 94% | 188.92 | 432 / 459 | 7% | 2.37 | 80 / 1118 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.61 | 1 / 1 |
adipose | 85% | 236.43 | 1022 / 1204 | 0% | 0 | 0 / 0 |
ovary | 7% | 5.59 | 12 / 180 | 48% | 28.98 | 207 / 430 |
prostate | 53% | 62.31 | 130 / 245 | 1% | 0.11 | 4 / 502 |
lung | 32% | 18.99 | 187 / 578 | 15% | 4.41 | 168 / 1155 |
skin | 20% | 10.21 | 364 / 1809 | 25% | 8.17 | 118 / 472 |
esophagus | 6% | 12.01 | 89 / 1445 | 19% | 3.48 | 35 / 183 |
pancreas | 0% | 0.10 | 1 / 328 | 19% | 3.09 | 34 / 178 |
blood vessel | 16% | 10.10 | 211 / 1335 | 0% | 0 | 0 / 0 |
brain | 6% | 192.59 | 164 / 2642 | 5% | 1.32 | 35 / 705 |
thymus | 8% | 5.60 | 49 / 653 | 0% | 0.03 | 2 / 605 |
liver | 0% | 0 | 0 / 226 | 1% | 0.21 | 5 / 406 |
spleen | 1% | 0.30 | 2 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.22 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
GO_0019233 | Biological process | sensory perception of pain |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0021516 | Biological process | dorsal spinal cord development |
GO_0048704 | Biological process | embryonic skeletal system morphogenesis |
GO_0045638 | Biological process | negative regulation of myeloid cell differentiation |
GO_0007625 | Biological process | grooming behavior |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | HOXB8 |
Protein name | Homeobox protein Hox-B8 (Homeobox protein Hox-2.4) (Homeobox protein Hox-2D) Homeobox B8 |
Synonyms | HOX2D hCG_1639847 |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. . FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. . |
Accessions | ENST00000239144.5 ENST00000576562.1 ENST00000498634.2 I3L3R1 I3L383 P17481 |