HDGFL3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	25 studies	27% ± 9%	Explore
endothelial cell of lymphatic vessel	11 studies	27% ± 8%	Explore
glutamatergic neuron	11 studies	41% ± 24%	Explore
amacrine cell	8 studies	31% ± 11%	Explore
oligodendrocyte precursor cell	8 studies	30% ± 14%	Explore
neuron	7 studies	38% ± 14%	Explore
fibroblast	7 studies	22% ± 4%	Explore
vein endothelial cell	7 studies	31% ± 16%	Explore
GABAergic neuron	7 studies	48% ± 18%	Explore
oligodendrocyte	7 studies	26% ± 9%	Explore
retina horizontal cell	6 studies	27% ± 8%	Explore
endothelial cell of artery	6 studies	26% ± 4%	Explore
endothelial cell of vascular tree	6 studies	29% ± 12%	Explore
astrocyte	6 studies	30% ± 11%	Explore
interneuron	6 studies	46% ± 21%	Explore
retinal cone cell	5 studies	23% ± 5%	Explore
retinal bipolar neuron	4 studies	22% ± 4%	Explore
epithelial cell	4 studies	37% ± 13%	Explore
capillary endothelial cell	4 studies	20% ± 5%	Explore
pericyte	4 studies	21% ± 4%	Explore
smooth muscle cell	4 studies	19% ± 2%	Explore
retinal ganglion cell	3 studies	34% ± 8%	Explore
myeloid cell	3 studies	18% ± 2%	Explore
retinal pigment epithelial cell	3 studies	27% ± 11%	Explore
GABAergic amacrine cell	3 studies	33% ± 1%	Explore
OFF-bipolar cell	3 studies	26% ± 4%	Explore
ON-bipolar cell	3 studies	22% ± 2%	Explore
glycinergic amacrine cell	3 studies	26% ± 5%	Explore
rod bipolar cell	3 studies	24% ± 3%	Explore
neural progenitor cell	3 studies	25% ± 3%	Explore
connective tissue cell	3 studies	20% ± 4%	Explore
myofibroblast cell	3 studies	23% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	9 studies	40% ± 18%	Explore
eye	5 studies	24% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
tonsil	0%	0	0 / 0	100%	10.74	45 / 45
ureter	0%	0	0 / 0	100%	4.28	1 / 1
brain	0%	0	0 / 0	100%	19.83	704 / 705
thymus	0%	0	0 / 0	100%	14.03	603 / 605
prostate	0%	0	0 / 0	99%	9.17	497 / 502
breast	0%	0	0 / 0	97%	14.88	1089 / 1118
adrenal gland	0%	0	0 / 0	95%	11.40	218 / 230
uterus	0%	0	0 / 0	95%	11.01	435 / 459
pancreas	0%	0	0 / 0	93%	7.54	166 / 178
ovary	0%	0	0 / 0	92%	7.15	397 / 430
kidney	0%	0	0 / 0	87%	5.73	788 / 901
lung	0%	0	0 / 0	87%	8.80	1006 / 1155
skin	0%	0	0 / 0	86%	8.78	407 / 472
bladder	0%	0	0 / 0	80%	7.20	403 / 504
esophagus	0%	0	0 / 0	74%	7.91	136 / 183
eye	0%	0	0 / 0	74%	4.08	59 / 80
lymph node	0%	0	0 / 0	66%	3.11	19 / 29
stomach	0%	0	0 / 0	58%	3.44	165 / 286
intestine	0%	0	0 / 0	47%	2.80	248 / 527
liver	0%	0	0 / 0	15%	1.16	60 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 0	0%	0	0 / 0
blood vessel	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 0	0%	0	0 / 0
muscle	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 0	0%	0	0 / 0