Insufficient scRNA-seq data for expression of H1-7 at single-cell level.
Insufficient scRNA-seq data for expression of H1-7 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 90% | 24.73 | 2382 / 2642 | 24% | 0.36 | 169 / 705 |
ovary | 98% | 50.16 | 177 / 180 | 1% | 0.01 | 3 / 430 |
adrenal gland | 97% | 28.88 | 250 / 258 | 1% | 0.02 | 3 / 230 |
spleen | 91% | 20.48 | 219 / 241 | 0% | 0 | 0 / 0 |
intestine | 91% | 20.13 | 875 / 966 | 0% | 0 | 0 / 527 |
bladder | 90% | 27.95 | 19 / 21 | 0% | 0 | 0 / 504 |
uterus | 87% | 18.04 | 148 / 170 | 1% | 0.01 | 4 / 459 |
muscle | 85% | 17.90 | 686 / 803 | 0% | 0 | 0 / 0 |
lung | 82% | 17.85 | 475 / 578 | 1% | 0.02 | 14 / 1155 |
prostate | 83% | 20.59 | 203 / 245 | 0% | 0.00 | 1 / 502 |
thymus | 78% | 16.22 | 512 / 653 | 1% | 0.01 | 5 / 605 |
blood vessel | 77% | 13.37 | 1023 / 1335 | 0% | 0 | 0 / 0 |
breast | 75% | 19.59 | 342 / 459 | 1% | 0.01 | 6 / 1118 |
esophagus | 65% | 11.08 | 936 / 1445 | 3% | 0.06 | 6 / 183 |
stomach | 68% | 9.38 | 243 / 359 | 0% | 0.00 | 1 / 286 |
adipose | 68% | 11.35 | 819 / 1204 | 0% | 0 | 0 / 0 |
kidney | 67% | 9.80 | 60 / 89 | 0% | 0.01 | 2 / 901 |
skin | 56% | 8.54 | 1007 / 1809 | 1% | 0.01 | 3 / 472 |
peripheral blood | 51% | 6.96 | 478 / 929 | 0% | 0 | 0 / 0 |
pancreas | 48% | 5.18 | 159 / 328 | 1% | 0.01 | 1 / 178 |
heart | 45% | 4.57 | 384 / 861 | 0% | 0 | 0 / 0 |
liver | 27% | 2.91 | 61 / 226 | 4% | 0.10 | 16 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007290 | Biological process | spermatid nucleus elongation |
GO_0035092 | Biological process | sperm DNA condensation |
GO_0045910 | Biological process | negative regulation of DNA recombination |
GO_0030261 | Biological process | chromosome condensation |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003690 | Molecular function | double-stranded DNA binding |
GO_0031492 | Molecular function | nucleosomal DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | H1-7 |
Protein name | Testis-specific H1 histone (Haploid germ cell-specific nuclear protein 1) (Histone H1.7) (Histone H1t2) |
Synonyms | H1FNT HANP1 |
Description | FUNCTION: Essential for normal spermatogenesis and male fertility . Required for proper cell restructuring and DNA condensation during the elongation phase of spermiogenesis. Involved in the histone-protamine transition of sperm chromatin and the subsequent production of functional sperm. Binds both double-stranded and single-stranded DNA, ATP and protamine-1. . |
Accessions | ENST00000335017.1 Q75WM6 |