Insufficient scRNA-seq data for expression of H1-1 at single-cell level.
Insufficient scRNA-seq data for expression of H1-1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 56% | 1.87 | 101 / 180 | 18% | 0.65 | 79 / 430 |
thymus | 65% | 2.27 | 424 / 653 | 0% | 0.00 | 2 / 605 |
liver | 45% | 1.16 | 101 / 226 | 1% | 0.02 | 5 / 406 |
bladder | 33% | 1.00 | 7 / 21 | 3% | 0.08 | 13 / 504 |
heart | 31% | 0.70 | 269 / 861 | 0% | 0 | 0 / 0 |
uterus | 24% | 0.54 | 40 / 170 | 2% | 0.08 | 8 / 459 |
esophagus | 17% | 0.37 | 242 / 1445 | 8% | 0.16 | 15 / 183 |
prostate | 23% | 0.49 | 56 / 245 | 1% | 0.04 | 4 / 502 |
kidney | 22% | 0.45 | 20 / 89 | 1% | 0.05 | 9 / 901 |
spleen | 19% | 0.49 | 46 / 241 | 0% | 0 | 0 / 0 |
breast | 17% | 0.37 | 76 / 459 | 2% | 0.35 | 24 / 1118 |
lung | 15% | 0.27 | 86 / 578 | 3% | 0.44 | 31 / 1155 |
skin | 17% | 0.36 | 302 / 1809 | 0% | 0 | 0 / 472 |
brain | 16% | 0.33 | 422 / 2642 | 0% | 0.05 | 3 / 705 |
intestine | 15% | 0.30 | 145 / 966 | 1% | 0.03 | 7 / 527 |
blood vessel | 16% | 0.30 | 215 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 15% | 0.27 | 49 / 328 | 1% | 0.05 | 2 / 178 |
peripheral blood | 15% | 0.31 | 143 / 929 | 0% | 0 | 0 / 0 |
adrenal gland | 15% | 0.25 | 39 / 258 | 0% | 0 | 0 / 230 |
stomach | 11% | 0.23 | 39 / 359 | 4% | 0.17 | 11 / 286 |
adipose | 14% | 0.27 | 174 / 1204 | 0% | 0 | 0 / 0 |
muscle | 8% | 0.12 | 61 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048260 | Biological process | positive regulation of receptor-mediated endocytosis |
GO_0007283 | Biological process | spermatogenesis |
GO_0045910 | Biological process | negative regulation of DNA recombination |
GO_0006334 | Biological process | nucleosome assembly |
GO_0030261 | Biological process | chromosome condensation |
GO_0009986 | Cellular component | cell surface |
GO_0000791 | Cellular component | euchromatin |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0031982 | Cellular component | vesicle |
GO_0000786 | Cellular component | nucleosome |
GO_0005634 | Cellular component | nucleus |
GO_0003690 | Molecular function | double-stranded DNA binding |
GO_0030527 | Molecular function | structural constituent of chromatin |
GO_0031490 | Molecular function | chromatin DNA binding |
GO_0008201 | Molecular function | heparin binding |
GO_0031492 | Molecular function | nucleosomal DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | H1-1 |
Protein name | Histone H1.1 (Histone H1a) |
Synonyms | HIST1H1A H1F1 |
Description | FUNCTION: Histone H1 protein binds to linker DNA between nucleosomes forming the macromolecular structure known as the chromatin fiber. Histones H1 are necessary for the condensation of nucleosome chains into higher-order structured fibers. Acts also as a regulator of individual gene transcription through chromatin remodeling, nucleosome spacing and DNA methylation (By similarity). . |
Accessions | ENST00000244573.5 Q02539 |