Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 24 studies | 26% ± 8% | |
endothelial cell | 18 studies | 29% ± 14% | |
glutamatergic neuron | 10 studies | 37% ± 15% | |
connective tissue cell | 8 studies | 25% ± 11% | |
epithelial cell | 7 studies | 39% ± 16% | |
ciliated cell | 7 studies | 31% ± 9% | |
Mueller cell | 6 studies | 48% ± 13% | |
astrocyte | 5 studies | 34% ± 18% | |
interneuron | 5 studies | 36% ± 19% | |
smooth muscle cell | 5 studies | 23% ± 4% | |
pericyte | 5 studies | 22% ± 6% | |
myofibroblast cell | 5 studies | 27% ± 8% | |
type II pneumocyte | 5 studies | 23% ± 8% | |
podocyte | 4 studies | 48% ± 25% | |
progenitor cell | 4 studies | 36% ± 11% | |
glial cell | 4 studies | 42% ± 14% | |
retinal pigment epithelial cell | 4 studies | 53% ± 12% | |
adipocyte | 4 studies | 23% ± 3% | |
GABAergic neuron | 4 studies | 32% ± 11% | |
club cell | 4 studies | 33% ± 16% | |
type I pneumocyte | 4 studies | 23% ± 8% | |
squamous epithelial cell | 3 studies | 35% ± 26% | |
neuron | 3 studies | 20% ± 2% | |
vein endothelial cell | 3 studies | 30% ± 17% | |
endothelial cell of vascular tree | 3 studies | 27% ± 13% | |
neural progenitor cell | 3 studies | 35% ± 11% | |
adventitial cell | 3 studies | 22% ± 5% | |
chondrocyte | 3 studies | 24% ± 4% | |
respiratory goblet cell | 3 studies | 46% ± 17% | |
Schwann cell | 3 studies | 41% ± 24% | |
melanocyte | 3 studies | 33% ± 12% | |
mesothelial cell | 3 studies | 31% ± 3% | |
mucus secreting cell | 3 studies | 29% ± 6% | |
basal cell | 3 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2425.77 | 244 / 245 | 100% | 17.33 | 500 / 502 |
lung | 99% | 1415.47 | 575 / 578 | 86% | 8.90 | 995 / 1155 |
kidney | 100% | 1538.39 | 89 / 89 | 84% | 9.70 | 761 / 901 |
pancreas | 100% | 1308.39 | 327 / 328 | 83% | 6.10 | 148 / 178 |
esophagus | 100% | 1418.66 | 1443 / 1445 | 81% | 7.13 | 149 / 183 |
adrenal gland | 100% | 2151.60 | 258 / 258 | 78% | 6.77 | 179 / 230 |
skin | 94% | 806.47 | 1704 / 1809 | 74% | 7.36 | 347 / 472 |
stomach | 100% | 1686.31 | 358 / 359 | 66% | 4.46 | 188 / 286 |
intestine | 99% | 1601.52 | 961 / 966 | 52% | 3.25 | 273 / 527 |
uterus | 100% | 3132.41 | 170 / 170 | 50% | 2.98 | 230 / 459 |
breast | 100% | 1685.62 | 458 / 459 | 50% | 2.34 | 556 / 1118 |
ovary | 100% | 2445.36 | 180 / 180 | 44% | 1.90 | 188 / 430 |
thymus | 99% | 1209.96 | 649 / 653 | 43% | 2.12 | 258 / 605 |
bladder | 100% | 1788.14 | 21 / 21 | 37% | 2.08 | 187 / 504 |
blood vessel | 100% | 3377.37 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 1282.71 | 1197 / 1204 | 0% | 0 | 0 / 0 |
brain | 47% | 337.96 | 1250 / 2642 | 41% | 1.78 | 286 / 705 |
muscle | 78% | 418.29 | 625 / 803 | 0% | 0 | 0 / 0 |
heart | 56% | 340.91 | 486 / 861 | 0% | 0 | 0 / 0 |
spleen | 50% | 241.60 | 120 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 40% | 1.76 | 18 / 45 |
eye | 0% | 0 | 0 / 0 | 35% | 1.91 | 28 / 80 |
liver | 4% | 18.50 | 9 / 226 | 20% | 1.69 | 81 / 406 |
peripheral blood | 0% | 0.56 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006911 | Biological process | phagocytosis, engulfment |
GO_0006915 | Biological process | apoptotic process |
GO_0006869 | Biological process | lipid transport |
GO_0005737 | Cellular component | cytoplasm |
Gene name | GULP1 |
Protein name | PTB domain-containing engulfment adapter protein 1 (Cell death protein 6 homolog) (PTB domain adapter protein CED-6) (Protein GULP) GULP PTB domain containing engulfment adaptor 1 |
Synonyms | GULP CED6 |
Description | FUNCTION: May function as an adapter protein. Required for efficient phagocytosis of apoptotic cells. Modulates cellular glycosphingolipid and cholesterol transport. May play a role in the internalization and endosomal trafficking of various LRP1 ligands, such as PSAP. Increases cellular levels of GTP-bound ARF6. . |
Accessions | ENST00000410051.5 [Q9UBP9-2] Q9UBP9 A0A8V8TQW5 ENST00000409637.7 [Q9UBP9-2] ENST00000409609.5 [Q9UBP9-1] ENST00000409805.5 [Q9UBP9-3] ENST00000451191.5 H7BZV7 ENST00000359135.7 [Q9UBP9-1] B8ZZL1 ENST00000409927.5 ENST00000409843.5 [Q9UBP9-4] A0A8V8TP70 ENST00000409830.6 [Q9UBP9-1] ENST00000699998.1 ENST00000433052.2 ENST00000409580.5 [Q9UBP9-1] H0Y6R1 ENST00000699997.1 |