Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 61% ± 18% | |
GABAergic neuron | 10 studies | 75% ± 22% | |
oligodendrocyte precursor cell | 10 studies | 28% ± 9% | |
astrocyte | 9 studies | 32% ± 20% | |
interneuron | 6 studies | 79% ± 16% | |
endothelial cell | 5 studies | 47% ± 21% | |
mesothelial cell | 5 studies | 40% ± 14% | |
neuron | 4 studies | 41% ± 18% | |
amacrine cell | 4 studies | 67% ± 10% | |
retina horizontal cell | 4 studies | 79% ± 15% | |
club cell | 4 studies | 34% ± 16% | |
basal cell | 4 studies | 27% ± 10% | |
GABAergic interneuron | 3 studies | 82% ± 16% | |
granule cell | 3 studies | 34% ± 13% | |
microglial cell | 3 studies | 45% ± 15% | |
cardiac muscle cell | 3 studies | 21% ± 4% | |
GABAergic amacrine cell | 3 studies | 91% ± 4% | |
glycinergic amacrine cell | 3 studies | 60% ± 7% | |
retinal ganglion cell | 3 studies | 52% ± 24% | |
respiratory goblet cell | 3 studies | 31% ± 17% | |
type I pneumocyte | 3 studies | 22% ± 8% | |
oligodendrocyte | 3 studies | 41% ± 23% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 98% | 396.75 | 241 / 245 | 96% | 3.63 | 482 / 502 |
thymus | 100% | 527.00 | 650 / 653 | 90% | 3.49 | 545 / 605 |
esophagus | 98% | 469.89 | 1418 / 1445 | 84% | 5.89 | 153 / 183 |
kidney | 99% | 249.01 | 88 / 89 | 78% | 2.73 | 703 / 901 |
bladder | 95% | 350.90 | 20 / 21 | 74% | 3.06 | 372 / 504 |
uterus | 85% | 160.39 | 145 / 170 | 81% | 3.75 | 370 / 459 |
ovary | 76% | 117.68 | 136 / 180 | 90% | 3.79 | 386 / 430 |
pancreas | 79% | 111.56 | 260 / 328 | 81% | 2.06 | 144 / 178 |
intestine | 99% | 504.93 | 956 / 966 | 54% | 1.32 | 282 / 527 |
breast | 57% | 148.49 | 263 / 459 | 94% | 6.03 | 1055 / 1118 |
brain | 72% | 253.23 | 1912 / 2642 | 56% | 1.57 | 394 / 705 |
skin | 72% | 589.92 | 1304 / 1809 | 54% | 2.47 | 254 / 472 |
adrenal gland | 41% | 58.86 | 106 / 258 | 81% | 4.80 | 186 / 230 |
stomach | 60% | 116.70 | 217 / 359 | 51% | 1.37 | 145 / 286 |
spleen | 93% | 184.32 | 223 / 241 | 0% | 0 | 0 / 0 |
lung | 12% | 12.89 | 70 / 578 | 76% | 3.17 | 873 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 80% | 3.91 | 36 / 45 |
heart | 54% | 145.05 | 463 / 861 | 0% | 0 | 0 / 0 |
adipose | 28% | 47.64 | 339 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 28% | 0.49 | 22 / 80 |
lymph node | 0% | 0 | 0 / 0 | 17% | 2.99 | 5 / 29 |
muscle | 13% | 14.34 | 105 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 11% | 0.27 | 44 / 406 |
blood vessel | 2% | 2.39 | 26 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.10 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0150012 | Biological process | positive regulation of neuron projection arborization |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0098887 | Biological process | neurotransmitter receptor transport, endosome to postsynaptic membrane |
GO_0014069 | Cellular component | postsynaptic density |
GO_0043204 | Cellular component | perikaryon |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0043005 | Cellular component | neuron projection |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0030425 | Cellular component | dendrite |
GO_0030159 | Molecular function | signaling receptor complex adaptor activity |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GRIP1 |
Protein name | Galectin Glutamate receptor interacting protein 1 Glutamate receptor-interacting protein 1 (GRIP-1) |
Synonyms | LGALS12 hCG_21321 |
Description | FUNCTION: May play a role as a localized scaffold for the assembly of a multiprotein signaling complex and as mediator of the trafficking of its binding partners at specific subcellular location in neurons . Through complex formation with NSG1, GRIA2 and STX12 controls the intracellular fate of AMPAR and the endosomal sorting of the GRIA2 subunit toward recycling and membrane targeting (By similarity). . |
Accessions | F5H424 ENST00000538164.5 ENST00000540433.5 ENST00000538211.5 ENST00000536215.5 Q9Y3R0 H0YGM4 A0A2R8Y6S7 ENST00000696989.1 F5H5I0 F5H4N6 A0A8V8TLS6 H0YFY3 ENST00000542309.5 ENST00000545666.5 ENST00000543172.5 F5H4P8 F5H4Q7 F5H3F9 ENST00000540854.5 ENST00000535002.1 F5H4M4 ENST00000359742.9 [Q9Y3R0-1] H0YGF1 ENST00000538373.1 ENST00000541947.1 H0YFK8 F5H3G9 Q9NZ03 ENST00000398016.7 [Q9Y3R0-3] ENST00000539540.5 ENST00000643019.1 |