Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 6 studies | 31% ± 12% | |
retinal cone cell | 5 studies | 26% ± 9% | |
oligodendrocyte | 5 studies | 26% ± 4% | |
endothelial cell | 4 studies | 27% ± 8% | |
glutamatergic neuron | 4 studies | 50% ± 17% | |
macrophage | 4 studies | 20% ± 5% | |
microglial cell | 3 studies | 20% ± 2% | |
epithelial cell | 3 studies | 25% ± 6% | |
retinal rod cell | 3 studies | 29% ± 7% | |
GABAergic neuron | 3 studies | 49% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 29% ± 4% | |
adipocyte | 3 studies | 19% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2865.90 | 21 / 21 | 100% | 14.90 | 504 / 504 |
esophagus | 100% | 2642.08 | 1445 / 1445 | 100% | 19.81 | 183 / 183 |
prostate | 100% | 2588.83 | 245 / 245 | 100% | 18.77 | 502 / 502 |
stomach | 100% | 2149.54 | 359 / 359 | 100% | 15.62 | 286 / 286 |
breast | 100% | 2445.98 | 459 / 459 | 100% | 23.60 | 1117 / 1118 |
intestine | 100% | 3007.70 | 966 / 966 | 100% | 15.28 | 526 / 527 |
brain | 100% | 1645.18 | 2639 / 2642 | 100% | 23.54 | 704 / 705 |
lung | 100% | 2273.38 | 577 / 578 | 100% | 15.86 | 1153 / 1155 |
skin | 100% | 2755.10 | 1809 / 1809 | 100% | 14.92 | 470 / 472 |
thymus | 100% | 2414.09 | 653 / 653 | 100% | 12.15 | 602 / 605 |
kidney | 100% | 1781.54 | 89 / 89 | 99% | 13.91 | 896 / 901 |
pancreas | 100% | 1861.27 | 328 / 328 | 99% | 14.23 | 177 / 178 |
uterus | 100% | 2541.84 | 170 / 170 | 99% | 16.28 | 456 / 459 |
liver | 100% | 1944.65 | 226 / 226 | 99% | 10.43 | 402 / 406 |
ovary | 100% | 2272.90 | 180 / 180 | 98% | 9.91 | 423 / 430 |
adrenal gland | 100% | 2885.01 | 258 / 258 | 98% | 14.07 | 226 / 230 |
adipose | 100% | 2388.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2306.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.07 | 29 / 29 |
spleen | 100% | 3282.77 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.60 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.40 | 1 / 1 |
muscle | 100% | 1984.50 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1501.53 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2146.93 | 901 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 10.25 | 73 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000139 | Cellular component | Golgi membrane |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | GOLGA1 |
Protein name | Golgin A1 Golgin subfamily A member 1 (Golgin-97) |
Synonyms | |
Description | FUNCTION: Involved in vesicular trafficking at the Golgi apparatus level. Involved in endosome-to-Golgi trafficking. . |
Accessions | ENST00000485337.1 R4GNH1 Q5T165 ENST00000373555.9 ENST00000475407.5 ENST00000421514.1 Q92805 H0YE54 |