GMPS report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	8 studies	26% ± 8%	Explore
natural killer cell	7 studies	24% ± 7%	Explore
CD4-positive, alpha-beta T cell	6 studies	22% ± 6%	Explore
CD8-positive, alpha-beta T cell	6 studies	22% ± 6%	Explore
hematopoietic precursor cell	5 studies	23% ± 8%	Explore
epithelial cell	5 studies	32% ± 9%	Explore
astrocyte	5 studies	29% ± 9%	Explore
fibroblast	4 studies	21% ± 4%	Explore
GABAergic neuron	4 studies	42% ± 15%	Explore
glutamatergic neuron	4 studies	48% ± 18%	Explore
oligodendrocyte precursor cell	4 studies	26% ± 9%	Explore
interneuron	4 studies	40% ± 21%	Explore
oligodendrocyte	4 studies	23% ± 5%	Explore
non-classical monocyte	3 studies	20% ± 6%	Explore
microglial cell	3 studies	22% ± 1%	Explore
lymphocyte	3 studies	18% ± 2%	Explore
ciliated cell	3 studies	18% ± 3%	Explore
dendritic cell	3 studies	30% ± 9%	Explore
granulocyte monocyte progenitor cell	3 studies	22% ± 5%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	37% ± 14%	Explore
pericyte	3 studies	19% ± 2%	Explore
erythrocyte	3 studies	32% ± 16%	Explore
macrophage	3 studies	19% ± 2%	Explore
basal cell	3 studies	32% ± 5%	Explore
goblet cell	3 studies	28% ± 13%	Explore
transit amplifying cell	3 studies	35% ± 18%	Explore
neuron	3 studies	25% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	17% ± 0%	Explore
plasmacytoid dendritic cell	3 studies	19% ± 3%	Explore
erythroblast	3 studies	33% ± 18%	Explore
regulatory T cell	3 studies	21% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	34% ± 13%	Explore
peripheral blood	4 studies	20% ± 4%	Explore
lung	3 studies	21% ± 4%	Explore
liver	3 studies	34% ± 14%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3011.79	459 / 459	100%	46.23	1118 / 1118
esophagus	100%	2702.99	1445 / 1445	100%	49.04	183 / 183
ovary	100%	3088.08	180 / 180	100%	37.09	430 / 430
lung	100%	2732.11	577 / 578	100%	42.61	1155 / 1155
uterus	100%	3416.71	170 / 170	100%	50.78	458 / 459
intestine	100%	2654.73	966 / 966	100%	30.70	525 / 527
bladder	100%	2968.43	21 / 21	100%	34.73	502 / 504
prostate	100%	2696.91	245 / 245	100%	27.88	500 / 502
stomach	100%	2199.33	359 / 359	99%	31.71	284 / 286
skin	100%	4138.45	1809 / 1809	99%	33.30	468 / 472
pancreas	100%	2126.75	327 / 328	99%	22.82	177 / 178
brain	99%	2193.61	2617 / 2642	100%	23.13	705 / 705
thymus	100%	2718.50	652 / 653	99%	22.55	598 / 605
kidney	100%	1773.82	89 / 89	97%	18.89	873 / 901
adrenal gland	100%	3269.39	258 / 258	93%	17.52	214 / 230
liver	97%	1111.35	219 / 226	93%	15.76	379 / 406
adipose	100%	2904.39	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3216.33	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	30.86	29 / 29
spleen	100%	2370.88	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	59.77	45 / 45
ureter	0%	0	0 / 0	100%	12.42	1 / 1
muscle	100%	1699.79	801 / 803	0%	0	0 / 0
heart	96%	1639.47	825 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	90%	11.95	72 / 80
peripheral blood	82%	2316.30	765 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0