Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 36% ± 24% | |
natural killer cell | 7 studies | 18% ± 2% | |
GABAergic neuron | 7 studies | 35% ± 20% | |
endothelial cell | 6 studies | 25% ± 6% | |
epithelial cell | 6 studies | 30% ± 10% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 21% ± 4% | |
astrocyte | 5 studies | 21% ± 5% | |
oligodendrocyte | 5 studies | 24% ± 6% | |
neuron | 4 studies | 24% ± 6% | |
oligodendrocyte precursor cell | 4 studies | 24% ± 7% | |
interneuron | 4 studies | 36% ± 19% | |
plasmacytoid dendritic cell | 4 studies | 22% ± 6% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 17% ± 1% | |
hematopoietic precursor cell | 3 studies | 20% ± 1% | |
ciliated cell | 3 studies | 30% ± 7% | |
basal cell | 3 studies | 25% ± 5% | |
transit amplifying cell | 3 studies | 24% ± 11% | |
goblet cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1072.80 | 1445 / 1445 | 100% | 32.78 | 183 / 183 |
ovary | 100% | 1200.09 | 180 / 180 | 100% | 21.62 | 430 / 430 |
prostate | 100% | 1290.92 | 245 / 245 | 100% | 29.20 | 502 / 502 |
stomach | 100% | 843.91 | 359 / 359 | 100% | 25.67 | 286 / 286 |
breast | 100% | 1376.39 | 459 / 459 | 100% | 28.36 | 1117 / 1118 |
lung | 100% | 1143.63 | 577 / 578 | 100% | 29.16 | 1155 / 1155 |
brain | 100% | 948.50 | 2637 / 2642 | 100% | 15.25 | 705 / 705 |
uterus | 100% | 1194.86 | 170 / 170 | 100% | 22.99 | 458 / 459 |
bladder | 100% | 1163.10 | 21 / 21 | 100% | 22.77 | 502 / 504 |
intestine | 100% | 1212.60 | 966 / 966 | 99% | 23.52 | 524 / 527 |
pancreas | 100% | 961.48 | 327 / 328 | 99% | 20.36 | 177 / 178 |
thymus | 100% | 1103.35 | 653 / 653 | 99% | 22.72 | 599 / 605 |
kidney | 100% | 970.83 | 89 / 89 | 98% | 22.43 | 886 / 901 |
liver | 100% | 677.73 | 226 / 226 | 94% | 14.35 | 381 / 406 |
skin | 100% | 1281.00 | 1809 / 1809 | 93% | 18.11 | 439 / 472 |
adrenal gland | 100% | 826.61 | 258 / 258 | 91% | 12.67 | 210 / 230 |
adipose | 100% | 1386.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1593.78 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1125.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.14 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.60 | 1 / 1 |
lymph node | 0% | 0 | 0 / 0 | 97% | 13.28 | 28 / 29 |
heart | 94% | 480.45 | 807 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 1047.16 | 867 / 929 | 0% | 0 | 0 / 0 |
muscle | 92% | 334.58 | 738 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 9.27 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0007281 | Biological process | germ cell development |
GO_0016363 | Cellular component | nuclear matrix |
GO_0005634 | Cellular component | nucleus |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GMCL1 |
Protein name | Germ cell-less protein-like 1 (Spermatogenesis-associated protein 29) Germ cell-less homolog 1 (Drosophila) |
Synonyms | BTBD13 GCL hCG_40576 SPATA29 FLJ13057 |
Description | FUNCTION: Possible function in spermatogenesis. Enhances the degradation of MDM2 and increases the amount of p53 probably by modulating the nucleocytoplasmic transport (By similarity). . |
Accessions | Q96IK5 ENST00000282570.4 Q53SE7 |