Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| classical monocyte | 24 studies | 45% ± 14% | |
| macrophage | 24 studies | 26% ± 10% | |
| conventional dendritic cell | 22 studies | 30% ± 11% | |
| non-classical monocyte | 22 studies | 30% ± 9% | |
| monocyte | 19 studies | 37% ± 13% | |
| neutrophil | 14 studies | 49% ± 19% | |
| dendritic cell | 12 studies | 33% ± 20% | |
| oligodendrocyte | 8 studies | 28% ± 8% | |
| alveolar macrophage | 7 studies | 29% ± 12% | |
| myeloid cell | 7 studies | 36% ± 16% | |
| microglial cell | 7 studies | 26% ± 8% | |
| mesothelial cell | 6 studies | 28% ± 15% | |
| B cell | 6 studies | 18% ± 2% | |
| mononuclear phagocyte | 4 studies | 33% ± 14% | |
| epithelial cell | 4 studies | 35% ± 15% | |
| endothelial cell | 4 studies | 22% ± 4% | |
| naive B cell | 4 studies | 19% ± 2% | |
| intermediate monocyte | 4 studies | 40% ± 19% | |
| plasmacytoid dendritic cell | 4 studies | 21% ± 4% | |
| hematopoietic precursor cell | 3 studies | 28% ± 3% | |
| common myeloid progenitor | 3 studies | 27% ± 8% | |
| ciliated cell | 3 studies | 22% ± 3% | |
| GABAergic neuron | 3 studies | 28% ± 8% | |
| glutamatergic neuron | 3 studies | 43% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| stomach | 100% | 1086.74 | 359 / 359 | 100% | 16.38 | 286 / 286 |
| thymus | 100% | 1027.57 | 653 / 653 | 99% | 14.97 | 601 / 605 |
| pancreas | 100% | 972.66 | 327 / 328 | 99% | 16.63 | 177 / 178 |
| lung | 100% | 2593.37 | 576 / 578 | 99% | 17.89 | 1148 / 1155 |
| prostate | 100% | 765.52 | 244 / 245 | 99% | 15.81 | 498 / 502 |
| brain | 100% | 1319.48 | 2629 / 2642 | 99% | 15.73 | 697 / 705 |
| kidney | 100% | 1116.28 | 89 / 89 | 98% | 13.67 | 886 / 901 |
| breast | 100% | 1100.64 | 459 / 459 | 98% | 14.70 | 1099 / 1118 |
| intestine | 99% | 848.40 | 953 / 966 | 99% | 16.18 | 523 / 527 |
| ovary | 97% | 561.32 | 174 / 180 | 100% | 18.45 | 430 / 430 |
| bladder | 100% | 619.24 | 21 / 21 | 96% | 14.86 | 485 / 504 |
| uterus | 99% | 655.12 | 168 / 170 | 97% | 13.33 | 447 / 459 |
| esophagus | 99% | 632.08 | 1425 / 1445 | 97% | 12.83 | 177 / 183 |
| adrenal gland | 100% | 902.46 | 257 / 258 | 96% | 9.77 | 220 / 230 |
| skin | 70% | 354.46 | 1270 / 1809 | 88% | 9.10 | 417 / 472 |
| liver | 88% | 551.55 | 200 / 226 | 70% | 6.65 | 284 / 406 |
| adipose | 100% | 1527.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 21.44 | 29 / 29 |
| peripheral blood | 100% | 24017.62 | 929 / 929 | 0% | 0 | 0 / 0 |
| spleen | 100% | 6904.29 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 11.33 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.52 | 1 / 1 |
| blood vessel | 100% | 1092.07 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| heart | 81% | 408.33 | 697 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 38% | 2.36 | 30 / 80 |
| muscle | 16% | 51.18 | 126 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0061025 | Biological process | membrane fusion |
| GO_0035578 | Cellular component | azurophil granule lumen |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005829 | Cellular component | cytosol |
| GO_0005576 | Cellular component | extracellular region |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0046982 | Molecular function | protein heterodimerization activity |
| GO_0042803 | Molecular function | protein homodimerization activity |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | GCA |
| Protein name | Grancalcin |
| Synonyms | GCL |
| Description | FUNCTION: Calcium-binding protein that may play a role in the adhesion of neutrophils to fibronectin. May play a role in the formation of focal adhesions. |
| Accessions | H7C2Z6 ENST00000233612.8 ENST00000446271.5 C9JWQ8 P28676 C9JIZ3 ENST00000437150.7 ENST00000453113.6 H7BXD5 ENST00000414723.1 C9JV47 ENST00000429691.6 |