Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 11 studies | 35% ± 11% | |
glutamatergic neuron | 4 studies | 36% ± 19% | |
epithelial cell | 3 studies | 20% ± 1% | |
GABAergic neuron | 3 studies | 35% ± 14% | |
astrocyte | 3 studies | 24% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 26% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 550.41 | 1809 / 1809 | 100% | 9.68 | 470 / 472 |
brain | 100% | 1031.25 | 2639 / 2642 | 100% | 7.33 | 702 / 705 |
kidney | 100% | 1443.48 | 89 / 89 | 99% | 11.56 | 894 / 901 |
prostate | 100% | 1065.32 | 245 / 245 | 99% | 6.74 | 498 / 502 |
thymus | 100% | 1829.33 | 653 / 653 | 99% | 11.93 | 599 / 605 |
adrenal gland | 100% | 1061.43 | 258 / 258 | 99% | 11.06 | 227 / 230 |
breast | 100% | 891.19 | 459 / 459 | 99% | 8.47 | 1102 / 1118 |
pancreas | 100% | 797.47 | 328 / 328 | 98% | 6.40 | 175 / 178 |
uterus | 100% | 940.95 | 170 / 170 | 97% | 6.77 | 447 / 459 |
esophagus | 100% | 857.25 | 1445 / 1445 | 97% | 5.50 | 178 / 183 |
bladder | 100% | 793.43 | 21 / 21 | 97% | 6.06 | 490 / 504 |
intestine | 100% | 721.21 | 966 / 966 | 97% | 5.97 | 512 / 527 |
lung | 100% | 845.86 | 577 / 578 | 96% | 6.29 | 1111 / 1155 |
stomach | 100% | 743.96 | 359 / 359 | 94% | 5.38 | 269 / 286 |
ovary | 100% | 1282.11 | 180 / 180 | 93% | 5.11 | 400 / 430 |
liver | 99% | 353.07 | 224 / 226 | 78% | 3.87 | 315 / 406 |
adipose | 100% | 635.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 432.39 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.07 | 1 / 1 |
blood vessel | 100% | 693.07 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 618.27 | 799 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 16.86 | 79 / 80 |
heart | 98% | 792.94 | 842 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 5.82 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.65 | 7 / 29 |
peripheral blood | 18% | 96.10 | 170 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_1904526 | Biological process | regulation of microtubule binding |
GO_0007368 | Biological process | determination of left/right symmetry |
GO_0051649 | Biological process | establishment of localization in cell |
GO_0003351 | Biological process | epithelial cilium movement involved in extracellular fluid movement |
GO_0045880 | Biological process | positive regulation of smoothened signaling pathway |
GO_0030317 | Biological process | flagellated sperm motility |
GO_0035082 | Biological process | axoneme assembly |
GO_0007420 | Biological process | brain development |
GO_0060294 | Biological process | cilium movement involved in cell motility |
GO_0008104 | Biological process | protein localization |
GO_1903566 | Biological process | positive regulation of protein localization to cilium |
GO_0036126 | Cellular component | sperm flagellum |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005874 | Cellular component | microtubule |
GO_0031514 | Cellular component | motile cilium |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005930 | Cellular component | axoneme |
GO_0005929 | Cellular component | cilium |
GO_0005829 | Cellular component | cytosol |
GO_0036064 | Cellular component | ciliary basal body |
GO_0031267 | Molecular function | small GTPase binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | GAS8 |
Protein name | Growth arrest specific 8 Dynein regulatory complex subunit 4 (Growth arrest-specific protein 8) Dynein regulatory complex subunit 4 (Growth arrest-specific protein 11) (GAS-11) (Growth arrest-specific protein 8) (GAS-8) |
Synonyms | DRC4 GAS11 |
Description | FUNCTION: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes. Plays an important role in the assembly of the N-DRC linker (By similarity). Plays dual roles at both the primary (or non-motile) cilia to regulate hedgehog signaling and in motile cilia to coordinate cilia movement. Required for proper motile cilia functioning . Positively regulates ciliary smoothened (SMO)-dependent Hedgehog (Hh) signaling pathway by facilitating the trafficking of SMO into the cilium and the stimulation of SMO activity in a GRK2-dependent manner (By similarity). . |
Accessions | ENST00000566266.5 A0A087WZT7 ENST00000536122.7 [O95995-2] ENST00000561675.1 ENST00000620723.4 H3BUA7 ENST00000565062.5 ENST00000268699.9 [O95995-1] H3BP65 O95995 ENST00000564392.5 H3BME0 H3BQT7 |