Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 11 studies | 55% ± 23% | |
| oligodendrocyte precursor cell | 10 studies | 36% ± 16% | |
| interneuron | 7 studies | 68% ± 19% | |
| amacrine cell | 6 studies | 41% ± 18% | |
| GABAergic amacrine cell | 4 studies | 51% ± 15% | |
| GABAergic interneuron | 3 studies | 62% ± 13% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 7 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 96% | 5898.65 | 2530 / 2642 | 98% | 25.73 | 690 / 705 |
| adrenal gland | 71% | 480.20 | 182 / 258 | 67% | 6.44 | 154 / 230 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.12 | 1 / 1 |
| kidney | 62% | 456.67 | 55 / 89 | 30% | 1.30 | 267 / 901 |
| blood vessel | 72% | 666.06 | 963 / 1335 | 0% | 0 | 0 / 0 |
| uterus | 7% | 36.52 | 12 / 170 | 57% | 3.03 | 261 / 459 |
| tonsil | 0% | 0 | 0 / 0 | 62% | 1.76 | 28 / 45 |
| bladder | 10% | 32.38 | 2 / 21 | 41% | 1.58 | 206 / 504 |
| esophagus | 0% | 1.03 | 4 / 1445 | 46% | 1.61 | 84 / 183 |
| pancreas | 0% | 0 | 0 / 328 | 44% | 1.11 | 78 / 178 |
| lung | 0% | 0.62 | 1 / 578 | 42% | 1.64 | 490 / 1155 |
| intestine | 0% | 0.39 | 1 / 966 | 42% | 1.51 | 223 / 527 |
| stomach | 0% | 0 | 0 / 359 | 34% | 1.48 | 96 / 286 |
| prostate | 7% | 29.22 | 16 / 245 | 26% | 0.46 | 129 / 502 |
| skin | 0% | 0.58 | 1 / 1809 | 21% | 0.75 | 98 / 472 |
| ovary | 0% | 0 | 0 / 180 | 16% | 0.51 | 67 / 430 |
| breast | 0% | 0.70 | 1 / 459 | 14% | 1.20 | 161 / 1118 |
| liver | 0% | 0 | 0 / 226 | 12% | 0.30 | 49 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 10% | 0.24 | 3 / 29 |
| peripheral blood | 3% | 21.27 | 30 / 929 | 0% | 0 | 0 / 0 |
| thymus | 0% | 6.56 | 2 / 653 | 2% | 0.07 | 14 / 605 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.26 | 2 / 80 |
| spleen | 0% | 1.33 | 1 / 241 | 0% | 0 | 0 / 0 |
| adipose | 0% | 0.69 | 2 / 1204 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006540 | Biological process | glutamate decarboxylation to succinate |
| GO_0007268 | Biological process | chemical synaptic transmission |
| GO_0006538 | Biological process | glutamate catabolic process |
| GO_0035176 | Biological process | social behavior |
| GO_0035641 | Biological process | locomotory exploration behavior |
| GO_0009449 | Biological process | gamma-aminobutyric acid biosynthetic process |
| GO_0061202 | Cellular component | clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0012506 | Cellular component | vesicle membrane |
| GO_0060077 | Cellular component | inhibitory synapse |
| GO_0043679 | Cellular component | axon terminus |
| GO_0098982 | Cellular component | GABA-ergic synapse |
| GO_0048786 | Cellular component | presynaptic active zone |
| GO_0005938 | Cellular component | cell cortex |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0030170 | Molecular function | pyridoxal phosphate binding |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0004351 | Molecular function | glutamate decarboxylase activity |
| Gene name | GAD1 |
| Protein name | Glutamate decarboxylase 1 isoform 2 Glutamate decarboxylase 1 (EC 4.1.1.15) Glutamate decarboxylase 1 isoform 3 Glutamate decarboxylase 1 Glutamate decarboxylase 1 (EC 4.1.1.15) (67 kDa glutamic acid decarboxylase) (GAD-67) (Glutamate decarboxylase 67 kDa isoform) |
| Synonyms | GAD GAD67 |
| Description | FUNCTION: Catalyzes the synthesis of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA) with pyridoxal 5'-phosphate as cofactor. .; FUNCTION: [Isoform 3]: Enzymatically inactive as glutamate decarboxylase. . FUNCTION: Catalyzes the synthesis of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA) with pyridoxal 5'-phosphate as cofactor. . FUNCTION: Catalyzes the synthesis of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA) with pyridoxal 5'-phosphate as cofactor. . |
| Accessions | ENST00000493875.5 [Q99259-4] ENST00000486850.1 C9JT43 ENST00000344257.9 [Q99259-3] ENST00000414527.6 Q8IVA8 A0A0S2Z3U2 Q99259 ENST00000375272.5 [Q99259-3] U3KQR2 C9JLZ7 ENST00000456864.5 A0A0S2Z3V5 C9JN45 ENST00000358196.8 [Q99259-1] ENST00000625689.2 [Q99259-4] A0A0S2Z4D9 ENST00000454603.5 ENST00000455008.5 F8WD43 ENST00000445006.5 C9J6C9 |