Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 11 studies | 37% ± 19% | |
glutamatergic neuron | 4 studies | 28% ± 5% | |
ependymal cell | 3 studies | 43% ± 20% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 23% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 3801.09 | 2597 / 2642 | 79% | 16.22 | 555 / 705 |
ovary | 21% | 121.66 | 38 / 180 | 4% | 0.18 | 16 / 430 |
adrenal gland | 0% | 0 | 0 / 258 | 8% | 0.84 | 19 / 230 |
thymus | 0% | 0.59 | 1 / 653 | 6% | 0.09 | 39 / 605 |
kidney | 0% | 0 | 0 / 89 | 4% | 0.09 | 36 / 901 |
uterus | 0% | 0 | 0 / 170 | 2% | 0.04 | 10 / 459 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
esophagus | 0% | 0 | 0 / 1445 | 1% | 0.07 | 2 / 183 |
prostate | 0% | 0 | 0 / 245 | 1% | 0.08 | 3 / 502 |
lung | 0% | 0 | 0 / 578 | 1% | 0.01 | 6 / 1155 |
adipose | 0% | 2.47 | 6 / 1204 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.01 | 2 / 406 |
skin | 0% | 0.23 | 1 / 1809 | 0% | 0.02 | 2 / 472 |
stomach | 0% | 0 | 0 / 359 | 0% | 0.00 | 1 / 286 |
breast | 0% | 0 | 0 / 459 | 0% | 0.00 | 2 / 1118 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 0% | 0 | 0 / 504 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
intestine | 0% | 0 | 0 / 966 | 0% | 0 | 0 / 527 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 0% | 0 | 0 / 178 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1904862 | Biological process | inhibitory synapse assembly |
GO_1902476 | Biological process | chloride transmembrane transport |
GO_0060078 | Biological process | regulation of postsynaptic membrane potential |
GO_0051932 | Biological process | synaptic transmission, GABAergic |
GO_0007214 | Biological process | gamma-aminobutyric acid signaling pathway |
GO_0005886 | Cellular component | plasma membrane |
GO_1902495 | Cellular component | transmembrane transporter complex |
GO_0098794 | Cellular component | postsynapse |
GO_0043005 | Cellular component | neuron projection |
GO_0034707 | Cellular component | chloride channel complex |
GO_0045202 | Cellular component | synapse |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_1902711 | Cellular component | GABA-A receptor complex |
GO_0032590 | Cellular component | dendrite membrane |
GO_0004890 | Molecular function | GABA-A receptor activity |
GO_0050811 | Molecular function | GABA receptor binding |
GO_0005254 | Molecular function | chloride channel activity |
GO_0022851 | Molecular function | GABA-gated chloride ion channel activity |
GO_0005515 | Molecular function | protein binding |
GO_0008503 | Molecular function | benzodiazepine receptor activity |
Gene name | GABRG1 |
Protein name | Gamma-aminobutyric acid receptor subunit gamma-1 (GABA(A) receptor subunit gamma-1) |
Synonyms | |
Description | FUNCTION: GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel. |
Accessions | ENST00000295452.5 Q8N1C3 |