GABRA6 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of GABRA6 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	79%	3448.02	2092 / 2642	0%	0.08	2 / 705
prostate	5%	1.28	13 / 245	0%	0.00	1 / 502
pancreas	5%	1.03	15 / 328	0%	0	0 / 178
ovary	4%	4.95	8 / 180	0%	0	0 / 430
adrenal gland	4%	14.53	11 / 258	0%	0	0 / 230
lung	4%	0.60	24 / 578	0%	0.00	1 / 1155
muscle	3%	0.57	27 / 803	0%	0	0 / 0
liver	3%	1.09	7 / 226	0%	0	0 / 406
uterus	3%	0.34	5 / 170	0%	0	0 / 459
peripheral blood	3%	0.50	27 / 929	0%	0	0 / 0
heart	3%	0.72	25 / 861	0%	0	0 / 0
esophagus	2%	0.59	32 / 1445	1%	0.01	1 / 183
stomach	2%	0.41	7 / 359	1%	0.01	2 / 286
thymus	2%	0.27	13 / 653	0%	0.00	1 / 605
spleen	2%	0.43	5 / 241	0%	0	0 / 0
skin	2%	0.31	31 / 1809	0%	0.03	1 / 472
adipose	2%	0.30	20 / 1204	0%	0	0 / 0
breast	2%	0.21	7 / 459	0%	0.00	1 / 1118
blood vessel	2%	0.42	21 / 1335	0%	0	0 / 0
intestine	1%	0.24	14 / 966	0%	0	0 / 527
kidney	1%	0.11	1 / 89	0%	0.00	1 / 901
abdomen	0%	0	0 / 0	0%	0	0 / 0
bladder	0%	0	0 / 21	0%	0	0 / 504
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007165	Biological process	signal transduction
GO_1904862	Biological process	inhibitory synapse assembly
GO_1902476	Biological process	chloride transmembrane transport
GO_0060078	Biological process	regulation of postsynaptic membrane potential
GO_0051932	Biological process	synaptic transmission, GABAergic
GO_0007214	Biological process	gamma-aminobutyric acid signaling pathway
GO_0005886	Cellular component	plasma membrane
GO_0099192	Cellular component	cerebellar Golgi cell to granule cell synapse
GO_1902495	Cellular component	transmembrane transporter complex
GO_0098794	Cellular component	postsynapse
GO_0043005	Cellular component	neuron projection
GO_0034707	Cellular component	chloride channel complex
GO_0045202	Cellular component	synapse
GO_1902711	Cellular component	GABA-A receptor complex
GO_0099634	Cellular component	postsynaptic specialization membrane
GO_0032590	Cellular component	dendrite membrane
GO_1904315	Molecular function	transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO_0004890	Molecular function	GABA-A receptor activity
GO_0005254	Molecular function	chloride channel activity
GO_0022851	Molecular function	GABA-gated chloride ion channel activity
GO_0008503	Molecular function	benzodiazepine receptor activity

Gene name	GABRA6
Protein name	Gamma-aminobutyric acid receptor subunit alpha-6 (GABA(A) receptor subunit alpha-6) Gamma-aminobutyric acid type A receptor subunit alpha6
Synonyms
Description	FUNCTION: GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.
Accessions	ENST00000274545.10 ENST00000523691.1 H0YBS7 ENST00000520000.5 ENST00000523217.5 H0YBP3 E7EV53 ENST00000517823.5 H0YAS3 Q16445

GABRA6 report