Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 7 studies | 41% ± 17% | |
endothelial cell | 4 studies | 19% ± 3% | |
Mueller cell | 4 studies | 20% ± 4% | |
GABAergic neuron | 3 studies | 30% ± 3% | |
glutamatergic neuron | 3 studies | 29% ± 4% | |
microglial cell | 3 studies | 17% ± 2% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 2% | |
interneuron | 3 studies | 30% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 24% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 276.13 | 1444 / 1445 | 100% | 6.59 | 183 / 183 |
intestine | 100% | 316.77 | 966 / 966 | 100% | 5.65 | 526 / 527 |
stomach | 100% | 282.31 | 359 / 359 | 100% | 6.06 | 285 / 286 |
lung | 99% | 336.44 | 574 / 578 | 100% | 5.12 | 1153 / 1155 |
thymus | 100% | 375.63 | 653 / 653 | 99% | 4.56 | 599 / 605 |
ovary | 100% | 505.21 | 180 / 180 | 99% | 4.07 | 425 / 430 |
breast | 100% | 378.56 | 459 / 459 | 98% | 4.99 | 1101 / 1118 |
skin | 100% | 655.15 | 1809 / 1809 | 98% | 6.08 | 463 / 472 |
pancreas | 100% | 287.72 | 327 / 328 | 98% | 3.84 | 175 / 178 |
brain | 98% | 312.64 | 2588 / 2642 | 100% | 5.13 | 703 / 705 |
uterus | 100% | 428.88 | 170 / 170 | 96% | 3.56 | 441 / 459 |
bladder | 100% | 345.14 | 21 / 21 | 96% | 4.04 | 482 / 504 |
prostate | 100% | 310.71 | 245 / 245 | 95% | 2.87 | 477 / 502 |
kidney | 100% | 274.78 | 89 / 89 | 95% | 3.90 | 856 / 901 |
adrenal gland | 99% | 400.21 | 256 / 258 | 89% | 2.79 | 205 / 230 |
liver | 94% | 152.58 | 212 / 226 | 61% | 1.43 | 249 / 406 |
adipose | 100% | 373.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 4.29 | 45 / 45 |
blood vessel | 100% | 371.50 | 1331 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 190.59 | 238 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 4.08 | 78 / 80 |
heart | 91% | 179.66 | 786 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 2.63 | 26 / 29 |
muscle | 56% | 56.39 | 446 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 34% | 147.32 | 316 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0097150 | Biological process | neuronal stem cell population maintenance |
GO_0009312 | Biological process | oligosaccharide biosynthetic process |
GO_0030097 | Biological process | hemopoiesis |
GO_0036445 | Biological process | neuronal stem cell division |
GO_0036065 | Biological process | fucosylation |
GO_0042355 | Biological process | L-fucose catabolic process |
GO_0006605 | Biological process | protein targeting |
GO_0036071 | Biological process | N-glycan fucosylation |
GO_0042060 | Biological process | wound healing |
GO_0006457 | Biological process | protein folding |
GO_0009566 | Biological process | fertilization |
GO_0097402 | Biological process | neuroblast migration |
GO_0007399 | Biological process | nervous system development |
GO_0021799 | Biological process | cerebral cortex radially oriented cell migration |
GO_0006486 | Biological process | protein glycosylation |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005764 | Cellular component | lysosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0046920 | Molecular function | alpha-(1->3)-fucosyltransferase activity |
Gene name | FUT10 |
Protein name | Alpha-(1,3)-fucosyltransferase 10 (EC 2.4.1.-) (Fucosyltransferase X) (Fuc-TX) (FucT-X) (Galactoside 3-L-fucosyltransferase 10) (Fucosyltransferase 10) |
Synonyms | |
Description | FUNCTION: Predominantly fucosylates the innermost N-acetyl glucosamine (GlcNAc) residue in biantennary N-glycan acceptors. Postulated to generate core alpha(1->3)-fucose epitope within the chitobiose unit of biantennary N-glycans, providing for a recognition signal to reorient aberrantly folded glycoproteins for degradation . Involved in biosynthesis of Lewis X-carrying biantennary N-glycans that regulate neuron stem cell self-renewal during brain development (By similarity). .; FUNCTION: [Isoform 1]: Catalyzes the transfer of fucosyl moiety from GDP-beta-L-fucose to the innermost GlcNAc residue in biantennary N-glycan acceptors. Does not fucosylate GlcNAc within type 2 lactosamine unit. .; FUNCTION: [Isoform 4]: Catalyzes the transfer of fucosyl moiety from GDP-beta-L-fucose to the innermost GlcNAc residue in biantennary N-glycan acceptors. Does not fucosylate GlcNAc within type 2 lactosamine unit. .; FUNCTION: [Isoform 5]: Catalyzes the transfer of fucosyl moiety from GDP-beta-L-fucose to the innermost GlcNAc residue in biantennary N-glycan acceptors. Does not fucosylate GlcNAc within type 2 lactosamine unit. . |
Accessions | ENST00000524021.1 [Q6P4F1-6] Q6P4F1 ENST00000327671.10 [Q6P4F1-1] ENST00000518672.5 [Q6P4F1-6] |