Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 11 studies | 23% ± 6% | |
fibroblast | 11 studies | 23% ± 8% | |
non-classical monocyte | 6 studies | 22% ± 8% | |
classical monocyte | 5 studies | 23% ± 4% | |
conventional dendritic cell | 5 studies | 22% ± 8% | |
epithelial cell | 5 studies | 39% ± 17% | |
myeloid cell | 4 studies | 24% ± 7% | |
plasma cell | 4 studies | 26% ± 11% | |
monocyte | 4 studies | 19% ± 5% | |
pancreatic A cell | 3 studies | 37% ± 13% | |
basal cell | 3 studies | 32% ± 9% | |
ciliated cell | 3 studies | 25% ± 6% | |
endothelial cell | 3 studies | 20% ± 6% | |
abnormal cell | 3 studies | 22% ± 3% | |
dendritic cell | 3 studies | 34% ± 6% | |
enterocyte | 3 studies | 19% ± 2% | |
goblet cell | 3 studies | 16% ± 1% | |
connective tissue cell | 3 studies | 27% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 2426.57 | 578 / 578 | 100% | 57.42 | 1155 / 1155 |
ovary | 100% | 2423.29 | 180 / 180 | 100% | 43.33 | 430 / 430 |
pancreas | 100% | 1645.31 | 328 / 328 | 100% | 55.66 | 178 / 178 |
stomach | 100% | 2067.69 | 359 / 359 | 100% | 72.25 | 286 / 286 |
breast | 100% | 2420.05 | 459 / 459 | 100% | 57.11 | 1117 / 1118 |
kidney | 100% | 2561.87 | 89 / 89 | 100% | 69.04 | 900 / 901 |
intestine | 100% | 2163.19 | 966 / 966 | 100% | 75.68 | 526 / 527 |
bladder | 100% | 2169.00 | 21 / 21 | 100% | 68.70 | 503 / 504 |
uterus | 100% | 2015.45 | 170 / 170 | 100% | 63.07 | 458 / 459 |
prostate | 100% | 1540.65 | 244 / 245 | 100% | 57.94 | 502 / 502 |
liver | 100% | 1808.54 | 225 / 226 | 100% | 63.28 | 404 / 406 |
esophagus | 100% | 1401.04 | 1444 / 1445 | 98% | 53.89 | 180 / 183 |
skin | 99% | 2342.07 | 1783 / 1809 | 100% | 66.79 | 470 / 472 |
adrenal gland | 100% | 3650.16 | 258 / 258 | 98% | 45.90 | 225 / 230 |
thymus | 100% | 2294.09 | 653 / 653 | 96% | 51.38 | 580 / 605 |
brain | 97% | 895.94 | 2570 / 2642 | 83% | 28.65 | 585 / 705 |
adipose | 100% | 2524.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2170.42 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 42.60 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 35.27 | 1 / 1 |
blood vessel | 100% | 1730.09 | 1331 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 54.86 | 79 / 80 |
heart | 98% | 1656.26 | 848 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 33.09 | 28 / 29 |
peripheral blood | 88% | 916.55 | 820 / 929 | 0% | 0 | 0 / 0 |
muscle | 49% | 239.45 | 395 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016139 | Biological process | glycoside catabolic process |
GO_2000535 | Biological process | regulation of entry of bacterium into host cell |
GO_0006004 | Biological process | fucose metabolic process |
GO_0009617 | Biological process | response to bacterium |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0005615 | Cellular component | extracellular space |
GO_0005764 | Cellular component | lysosome |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0004560 | Molecular function | alpha-L-fucosidase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | FUCA2 |
Protein name | Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2) alpha-L-fucosidase (EC 3.2.1.51) |
Synonyms | PSEC0151 UNQ227/PRO260 |
Description | FUNCTION: Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. |
Accessions | ENST00000451668.1 Q9BTY2 Q7Z6V2 ENST00000002165.11 [Q9BTY2-1] |