Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 47% ± 20% | |
GABAergic neuron | 8 studies | 41% ± 21% | |
endothelial cell | 6 studies | 30% ± 17% | |
interneuron | 6 studies | 35% ± 13% | |
type I pneumocyte | 6 studies | 24% ± 9% | |
epithelial cell | 5 studies | 35% ± 8% | |
mesothelial cell | 5 studies | 43% ± 16% | |
neuron | 4 studies | 48% ± 25% | |
club cell | 4 studies | 24% ± 12% | |
fibroblast | 4 studies | 24% ± 4% | |
GABAergic interneuron | 3 studies | 35% ± 1% | |
microglial cell | 3 studies | 51% ± 14% | |
renal principal cell | 3 studies | 63% ± 31% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 2220.67 | 328 / 328 | 85% | 6.27 | 151 / 178 |
thymus | 100% | 6779.75 | 650 / 653 | 81% | 6.99 | 492 / 605 |
kidney | 100% | 3591.34 | 89 / 89 | 78% | 8.97 | 702 / 901 |
prostate | 94% | 1939.56 | 231 / 245 | 79% | 4.73 | 399 / 502 |
lung | 99% | 2498.20 | 574 / 578 | 57% | 4.89 | 662 / 1155 |
esophagus | 92% | 1038.00 | 1334 / 1445 | 62% | 6.44 | 114 / 183 |
skin | 90% | 2127.65 | 1633 / 1809 | 35% | 2.63 | 164 / 472 |
intestine | 81% | 1851.87 | 781 / 966 | 37% | 2.29 | 196 / 527 |
uterus | 64% | 752.11 | 108 / 170 | 49% | 4.57 | 225 / 459 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.86 | 1 / 1 |
stomach | 57% | 545.67 | 203 / 359 | 43% | 3.62 | 122 / 286 |
breast | 68% | 578.23 | 312 / 459 | 24% | 1.43 | 264 / 1118 |
ovary | 16% | 84.44 | 28 / 180 | 66% | 4.63 | 282 / 430 |
heart | 71% | 554.52 | 611 / 861 | 0% | 0 | 0 / 0 |
brain | 58% | 711.34 | 1539 / 2642 | 11% | 0.57 | 77 / 705 |
adrenal gland | 24% | 116.57 | 61 / 258 | 43% | 2.56 | 100 / 230 |
adipose | 66% | 1019.98 | 797 / 1204 | 0% | 0 | 0 / 0 |
bladder | 10% | 41.43 | 2 / 21 | 41% | 2.80 | 207 / 504 |
blood vessel | 43% | 337.11 | 568 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 42% | 2.55 | 19 / 45 |
muscle | 37% | 302.84 | 296 / 803 | 0% | 0 | 0 / 0 |
liver | 6% | 25.53 | 14 / 226 | 24% | 3.49 | 98 / 406 |
spleen | 27% | 180.66 | 65 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.04 | 1 / 80 |
peripheral blood | 0% | 0.83 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007154 | Biological process | cell communication |
GO_0015031 | Biological process | protein transport |
GO_0060021 | Biological process | roof of mouth development |
GO_0043588 | Biological process | skin development |
GO_0002009 | Biological process | morphogenesis of an epithelium |
GO_0030326 | Biological process | embryonic limb morphogenesis |
GO_0003338 | Biological process | metanephros morphogenesis |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0005604 | Cellular component | basement membrane |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0005886 | Cellular component | plasma membrane |
GO_0046872 | Molecular function | metal ion binding |
Gene name | FRAS1 |
Protein name | Uncharacterized protein FRAS1 Fraser extracellular matrix complex subunit 1 FRAS1 protein Extracellular matrix organizing protein FRAS1 Extracellular matrix organizing protein FRAS1 (Fraser syndrome 1 protein) |
Synonyms | KIAA1500 |
Description | FUNCTION: Involved in extracellular matrix organization (By similarity). Required for the regulation of epidermal-basement membrane adhesion responsible for proper organogenesis during embryonic development (By similarity). Involved in brain organization and function (By similarity). . |
Accessions | ENST00000510944.3 A0A804HL50 A0A804HI32 ENST00000684159.1 ENST00000502446 Q4W596 ENST00000502446.6 [Q86XX4-4] ENST00000325942.11 [Q86XX4-5] H0Y9A6 ENST00000682513.1 ENST00000512123.4 [Q86XX4-2] A2RRR9 Q05CW8 H0Y8V2 ENST00000508900.2 [Q86XX4-6] H0Y9C9 Q86XX4 ENST00000508900 |