Insufficient scRNA-seq data for expression of FIGLA at single-cell level.
Insufficient scRNA-seq data for expression of FIGLA at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 85% | 13.04 | 145 / 170 | 2% | 0.05 | 11 / 459 |
pancreas | 80% | 11.72 | 263 / 328 | 1% | 0.01 | 1 / 178 |
breast | 74% | 7.19 | 341 / 459 | 3% | 0.07 | 32 / 1118 |
prostate | 76% | 6.48 | 185 / 245 | 0% | 0 | 0 / 502 |
ovary | 71% | 12.82 | 127 / 180 | 3% | 0.05 | 14 / 430 |
spleen | 61% | 2.83 | 148 / 241 | 0% | 0 | 0 / 0 |
esophagus | 56% | 3.78 | 816 / 1445 | 1% | 0.02 | 1 / 183 |
adipose | 54% | 4.99 | 654 / 1204 | 0% | 0 | 0 / 0 |
bladder | 52% | 3.00 | 11 / 21 | 0% | 0.00 | 1 / 504 |
stomach | 48% | 2.47 | 173 / 359 | 1% | 0.02 | 3 / 286 |
intestine | 46% | 2.29 | 443 / 966 | 0% | 0.01 | 1 / 527 |
lung | 45% | 2.48 | 262 / 578 | 1% | 0.01 | 7 / 1155 |
heart | 45% | 2.22 | 384 / 861 | 0% | 0 | 0 / 0 |
skin | 42% | 2.10 | 761 / 1809 | 0% | 0.00 | 1 / 472 |
blood vessel | 36% | 1.69 | 483 / 1335 | 0% | 0 | 0 / 0 |
kidney | 30% | 1.04 | 27 / 89 | 0% | 0.01 | 2 / 901 |
thymus | 27% | 0.93 | 174 / 653 | 0% | 0 | 0 / 605 |
muscle | 25% | 0.89 | 199 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 9% | 0.29 | 87 / 929 | 0% | 0 | 0 / 0 |
adrenal gland | 8% | 0.19 | 21 / 258 | 0% | 0.01 | 1 / 230 |
liver | 7% | 0.20 | 16 / 226 | 0% | 0.01 | 2 / 406 |
brain | 5% | 0.13 | 132 / 2642 | 1% | 0.01 | 6 / 705 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048599 | Biological process | oocyte development |
GO_0032502 | Biological process | developmental process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0070888 | Molecular function | E-box binding |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0043425 | Molecular function | bHLH transcription factor binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | FIGLA |
Protein name | Factor in the germline alpha (FIGalpha) (Class C basic helix-loop-helix protein 8) (bHLHc8) (Folliculogenesis-specific basic helix-loop-helix protein) (Transcription factor FIGa) |
Synonyms | BHLHC8 |
Description | FUNCTION: Germline specific transcription factor implicated in postnatal oocyte-specific gene expression. Plays a key regulatory role in the expression of multiple oocyte-specific genes, including those that initiate folliculogenesis and those that encode the zona pellucida (ZP1, ZP2 and ZP3) required for fertilization and early embryonic survival. Essential for oocytes to survive and form primordial follicles. The persistence of FIGLA in adult females suggests that it may regulate additional pathways that are essential for normal ovarian development. Binds to the E-box (5'-CANNTG-3') of the ZPs (ZP1, ZP2, ZP3) promoters. . |
Accessions | ENST00000332372.6 Q6QHK4 |