Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 34% ± 16% | |
plasmablast | 3 studies | 43% ± 15% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
fibroblast | 3 studies | 22% ± 6% | |
GABAergic neuron | 3 studies | 23% ± 2% | |
glutamatergic neuron | 3 studies | 27% ± 5% | |
dendritic cell | 3 studies | 32% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3020.02 | 459 / 459 | 100% | 164.70 | 1118 / 1118 |
liver | 100% | 7744.84 | 226 / 226 | 100% | 276.82 | 406 / 406 |
uterus | 100% | 2719.34 | 170 / 170 | 100% | 136.14 | 459 / 459 |
esophagus | 100% | 3801.83 | 1444 / 1445 | 100% | 98.19 | 183 / 183 |
intestine | 100% | 4466.59 | 966 / 966 | 100% | 128.23 | 526 / 527 |
stomach | 100% | 3411.22 | 358 / 359 | 100% | 110.23 | 286 / 286 |
skin | 100% | 4288.65 | 1807 / 1809 | 100% | 149.03 | 471 / 472 |
kidney | 100% | 4264.97 | 89 / 89 | 100% | 98.90 | 897 / 901 |
prostate | 100% | 2273.90 | 244 / 245 | 100% | 105.41 | 501 / 502 |
thymus | 100% | 2629.60 | 650 / 653 | 100% | 79.16 | 604 / 605 |
ovary | 99% | 2012.13 | 179 / 180 | 100% | 86.41 | 429 / 430 |
bladder | 100% | 3082.90 | 21 / 21 | 99% | 112.79 | 499 / 504 |
brain | 99% | 2959.55 | 2607 / 2642 | 100% | 96.01 | 705 / 705 |
adrenal gland | 100% | 6008.34 | 258 / 258 | 98% | 92.04 | 226 / 230 |
pancreas | 98% | 1737.91 | 322 / 328 | 100% | 78.54 | 178 / 178 |
lung | 98% | 2327.90 | 567 / 578 | 100% | 102.28 | 1155 / 1155 |
adipose | 100% | 3079.20 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 106.41 | 29 / 29 |
muscle | 100% | 8195.19 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2484.55 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 125.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 65.52 | 1 / 1 |
blood vessel | 100% | 2609.88 | 1330 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 103.51 | 79 / 80 |
heart | 96% | 8173.66 | 826 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 57% | 2167.70 | 527 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006281 | Biological process | DNA repair |
GO_0006106 | Biological process | fumarate metabolic process |
GO_0006108 | Biological process | malate metabolic process |
GO_0006099 | Biological process | tricarboxylic acid cycle |
GO_0048873 | Biological process | homeostasis of number of cells within a tissue |
GO_0120162 | Biological process | positive regulation of cold-induced thermogenesis |
GO_0005694 | Cellular component | chromosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0004333 | Molecular function | fumarate hydratase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | FH |
Protein name | Fumarate hydratase isoform 7 Fumarate hydratase isoform 4 Fumarate hydratase isoform 5 Fumarate hydratase Fumarate hydratase isoform 6 Fumarate hydratase isoform 2 Fumarate hydratase, mitochondrial (Fumarase) (HsFH) (EC 4.2.1.2) Fumarate hydratase, mitochondrial (EC 4.2.1.2) |
Synonyms | |
Description | FUNCTION: Catalyzes the reversible stereospecific interconversion of fumarate to L-malate . Experiments in other species have demonstrated that specific isoforms of this protein act in defined pathways and favor one direction over the other (Probable). .; FUNCTION: [Isoform Mitochondrial]: Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH. .; FUNCTION: [Isoform Cytoplasmic]: Catalyzes the dehydration of L-malate to fumarate (By similarity). Fumarate metabolism in the cytosol plays a role during urea cycle and arginine metabolism; fumarate being a by-product of the urea cycle and amino-acid catabolism (By similarity). Also plays a role in DNA repair by promoting non-homologous end-joining (NHEJ) . In response to DNA damage and phosphorylation by PRKDC, translocates to the nucleus and accumulates at DNA double-strand breaks (DSBs): acts by catalyzing formation of fumarate, an inhibitor of KDM2B histone demethylase activity, resulting in enhanced dimethylation of histone H3 'Lys-36' (H3K36me2) . . FUNCTION: Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH. . FUNCTION: Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH. . |
Accessions | P07954 A0A0S2Z4C3 A0A0S2Z3W2 A0A0S2Z3X6 A0A804HKE6 A0A804HI24 A0A804HL52 ENST00000682162.1 A0A0S2Z3S9 A0A0S2Z408 ENST00000366560.4 [P07954-1] ENST00000684483.1 Q7Z6G0 ENST00000683521.1 A0A0S2Z4H0 |