Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 8 studies | 23% ± 7% | |
| epithelial cell | 6 studies | 25% ± 7% | |
| endothelial cell of lymphatic vessel | 5 studies | 20% ± 4% | |
| oligodendrocyte | 5 studies | 22% ± 6% | |
| astrocyte | 4 studies | 25% ± 9% | |
| retina horizontal cell | 3 studies | 23% ± 4% | |
| GABAergic neuron | 3 studies | 39% ± 5% | |
| glutamatergic neuron | 3 studies | 49% ± 5% | |
| basal cell | 3 studies | 21% ± 4% | |
| goblet cell | 3 studies | 23% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 38% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 3318.94 | 245 / 245 | 100% | 35.02 | 502 / 502 |
| thymus | 100% | 2849.20 | 653 / 653 | 100% | 14.02 | 605 / 605 |
| brain | 100% | 1904.91 | 2637 / 2642 | 100% | 12.06 | 705 / 705 |
| liver | 100% | 2177.92 | 226 / 226 | 100% | 8.41 | 405 / 406 |
| kidney | 100% | 1880.11 | 89 / 89 | 99% | 11.01 | 896 / 901 |
| pancreas | 100% | 2283.95 | 328 / 328 | 99% | 7.01 | 177 / 178 |
| stomach | 100% | 1887.63 | 359 / 359 | 99% | 8.39 | 284 / 286 |
| breast | 100% | 2207.82 | 459 / 459 | 99% | 10.85 | 1107 / 1118 |
| skin | 100% | 2002.52 | 1809 / 1809 | 99% | 10.16 | 467 / 472 |
| esophagus | 100% | 1810.54 | 1445 / 1445 | 99% | 8.55 | 181 / 183 |
| bladder | 100% | 2146.48 | 21 / 21 | 99% | 6.87 | 498 / 504 |
| lung | 99% | 1713.48 | 575 / 578 | 99% | 7.64 | 1145 / 1155 |
| uterus | 100% | 1960.92 | 170 / 170 | 98% | 7.14 | 451 / 459 |
| intestine | 100% | 2218.80 | 966 / 966 | 98% | 7.88 | 517 / 527 |
| adrenal gland | 100% | 2908.12 | 258 / 258 | 98% | 8.93 | 225 / 230 |
| ovary | 100% | 1878.48 | 180 / 180 | 96% | 6.13 | 411 / 430 |
| adipose | 100% | 2008.37 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2049.54 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 14.55 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 6.70 | 29 / 29 |
| spleen | 100% | 1354.74 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 10.79 | 45 / 45 |
| muscle | 100% | 1442.77 | 801 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 1367.31 | 848 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 58% | 465.35 | 542 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0016567 | Biological process | protein ubiquitination |
| GO_0019005 | Cellular component | SCF ubiquitin ligase complex |
| GO_0005730 | Cellular component | nucleolus |
| GO_0000151 | Cellular component | ubiquitin ligase complex |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
| GO_0003779 | Molecular function | actin binding |
| Gene name | FBXO25 |
| Protein name | F-box protein 25 F-box only protein 25 |
| Synonyms | FBX25 |
| Description | FUNCTION: Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. May play a role in accumulation of expanded polyglutamine (polyQ) protein huntingtin (HTT) (By similarity). . |
| Accessions | ENST00000276326.9 [Q8TCJ0-3] E5RFH9 ENST00000519274.1 Q8TCJ0 H0YBS4 ENST00000382824.5 [Q8TCJ0-1] ENST00000350302.8 [Q8TCJ0-2] ENST00000518240.5 ENST00000352684.2 [Q8TCJ0-3] |
