Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 7 studies | 34% ± 19% | |
ciliated cell | 7 studies | 41% ± 23% | |
glutamatergic neuron | 5 studies | 51% ± 25% | |
GABAergic neuron | 5 studies | 45% ± 19% | |
oligodendrocyte | 5 studies | 26% ± 14% | |
retinal cone cell | 4 studies | 23% ± 7% | |
endothelial cell | 3 studies | 24% ± 2% | |
mesothelial cell | 3 studies | 30% ± 4% | |
retinal rod cell | 3 studies | 31% ± 7% | |
smooth muscle cell | 3 studies | 16% ± 0% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 11% | |
ependymal cell | 3 studies | 51% ± 9% | |
interneuron | 3 studies | 53% ± 23% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 127.66 | 180 / 180 | 59% | 1.25 | 254 / 430 |
thymus | 100% | 74.89 | 652 / 653 | 42% | 0.60 | 254 / 605 |
breast | 97% | 65.12 | 447 / 459 | 38% | 1.13 | 428 / 1118 |
kidney | 98% | 43.54 | 87 / 89 | 34% | 0.63 | 307 / 901 |
pancreas | 94% | 32.67 | 307 / 328 | 36% | 0.65 | 64 / 178 |
adrenal gland | 100% | 117.32 | 258 / 258 | 29% | 0.90 | 66 / 230 |
lung | 98% | 74.24 | 567 / 578 | 29% | 1.11 | 340 / 1155 |
stomach | 100% | 251.62 | 358 / 359 | 22% | 0.50 | 62 / 286 |
skin | 88% | 27.62 | 1589 / 1809 | 33% | 0.74 | 155 / 472 |
uterus | 99% | 76.54 | 169 / 170 | 17% | 0.47 | 78 / 459 |
esophagus | 79% | 25.62 | 1147 / 1445 | 34% | 1.05 | 63 / 183 |
brain | 87% | 30.61 | 2298 / 2642 | 22% | 0.40 | 155 / 705 |
prostate | 100% | 45.46 | 245 / 245 | 9% | 0.15 | 43 / 502 |
bladder | 95% | 37.86 | 20 / 21 | 11% | 0.31 | 53 / 504 |
blood vessel | 98% | 56.99 | 1314 / 1335 | 0% | 0 | 0 / 0 |
adipose | 98% | 69.89 | 1178 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 169.06 | 904 / 929 | 0% | 0 | 0 / 0 |
intestine | 82% | 23.81 | 791 / 966 | 13% | 0.28 | 69 / 527 |
spleen | 94% | 45.14 | 226 / 241 | 0% | 0 | 0 / 0 |
heart | 62% | 16.84 | 534 / 861 | 0% | 0 | 0 / 0 |
muscle | 41% | 8.88 | 330 / 803 | 0% | 0 | 0 / 0 |
liver | 21% | 4.08 | 48 / 226 | 4% | 0.11 | 17 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.17 | 2 / 29 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.06 | 2 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0031146 | Biological process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
GO_0019005 | Cellular component | SCF ubiquitin ligase complex |
GO_0005813 | Cellular component | centrosome |
GO_0031514 | Cellular component | motile cilium |
GO_0005829 | Cellular component | cytosol |
Gene name | FBXL13 |
Protein name | F-box and leucine-rich repeat protein 13, isoform CRA_b (FBXL13 protein) F-box and leucine-rich repeat protein 13 (Dynein regulatory complex subunit 6) (F-box/LRR-repeat protein 13) F-box and leucine rich repeat protein 13 |
Synonyms | DRC6 hCG_1646251 FBL13 |
Description | FUNCTION: Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes. Specifically targets CEP192 isoform 3 for ubiquitin-mediated proteolysis and thereby acts as a regulator of microtubule nucleation activity . . |
Accessions | A0A8Q3WK56 ENST00000440067.4 E7ERH8 ENST00000313221.8 [Q8NEE6-1] Q8NEE6 ENST00000379305.7 ENST00000456695.6 C9JI88 ENST00000694871.1 ENST00000471074.1 A0A8V8NC12 Q4G192 A0A8Q3WLA0 A0A8Q3WK79 ENST00000448002.6 ENST00000694870.1 A0A8Q3WKA2 ENST00000477915.5 ENST00000455112.7 |