FANCF | OmnibusX

Name	Number of supported studies	Average coverage
epithelial cell	3 studies	26% ± 5%	Explore
ciliated cell	3 studies	20% ± 3%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of FANCF at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	536.30	180 / 180	100%	18.92	430 / 430
pancreas	100%	840.48	328 / 328	100%	17.53	178 / 178
prostate	100%	594.63	245 / 245	100%	23.53	502 / 502
kidney	100%	550.29	89 / 89	100%	16.47	898 / 901
stomach	99%	566.53	357 / 359	100%	22.34	286 / 286
thymus	100%	573.42	653 / 653	99%	17.42	601 / 605
brain	99%	405.54	2622 / 2642	100%	14.36	703 / 705
breast	99%	465.07	455 / 459	100%	29.90	1115 / 1118
skin	100%	562.60	1807 / 1809	99%	17.64	466 / 472
intestine	99%	567.54	958 / 966	99%	23.85	522 / 527
bladder	100%	462.33	21 / 21	98%	18.54	492 / 504
esophagus	99%	406.56	1425 / 1445	98%	16.65	180 / 183
liver	100%	462.15	226 / 226	96%	11.24	388 / 406
adrenal gland	100%	687.76	257 / 258	94%	11.36	217 / 230
lung	94%	371.18	544 / 578	99%	18.20	1149 / 1155
uterus	99%	533.62	169 / 170	93%	15.14	429 / 459
spleen	100%	931.48	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	8.51	1 / 1
adipose	99%	327.03	1188 / 1204	0%	0	0 / 0
blood vessel	99%	323.52	1317 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	19.06	28 / 29
tonsil	0%	0	0 / 0	96%	11.06	43 / 45
eye	0%	0	0 / 0	95%	11.55	76 / 80
heart	94%	269.88	808 / 861	0%	0	0 / 0
peripheral blood	82%	455.28	760 / 929	0%	0	0 / 0
muscle	51%	77.31	406 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006974	Biological process	DNA damage response
GO_0036297	Biological process	interstrand cross-link repair
GO_0043240	Cellular component	Fanconi anaemia nuclear complex
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0000785	Cellular component	chromatin
GO_0005515	Molecular function	protein binding
GO_0003674	Molecular function	molecular_function

Gene name	FANCF
Protein name	Fanconi anemia, complementation group F (cDNA FLJ10854 fis, clone NT2RP4001507, highly similar to Fanconi anemia group F protein) Fanconi anemia group F protein (Protein FACF)
Synonyms	hCG_1646608
Description	FUNCTION: DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability (By similarity). .
Accessions	ENST00000327470.6 Q9NPI8 A3KME0

FANCF report