Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 17% ± 2% | |
plasmacytoid dendritic cell | 7 studies | 32% ± 16% | |
natural killer cell | 5 studies | 20% ± 2% | |
mast cell | 5 studies | 20% ± 4% | |
classical monocyte | 4 studies | 23% ± 5% | |
fibroblast | 4 studies | 27% ± 10% | |
epithelial cell | 4 studies | 30% ± 16% | |
macrophage | 4 studies | 17% ± 1% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
CD8-positive, alpha-beta T cell | 3 studies | 18% ± 3% | |
astrocyte | 3 studies | 21% ± 2% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 3% | |
oligodendrocyte | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2724.50 | 1445 / 1445 | 100% | 16.00 | 183 / 183 |
prostate | 100% | 3070.09 | 245 / 245 | 99% | 26.39 | 498 / 502 |
ovary | 100% | 2869.38 | 180 / 180 | 99% | 21.66 | 426 / 430 |
stomach | 100% | 2540.75 | 359 / 359 | 99% | 13.95 | 283 / 286 |
breast | 100% | 2311.29 | 459 / 459 | 99% | 21.85 | 1106 / 1118 |
brain | 99% | 2962.48 | 2621 / 2642 | 100% | 26.73 | 702 / 705 |
skin | 100% | 2380.01 | 1806 / 1809 | 99% | 19.81 | 466 / 472 |
intestine | 100% | 2869.26 | 966 / 966 | 98% | 13.60 | 519 / 527 |
lung | 100% | 2915.15 | 577 / 578 | 99% | 15.55 | 1139 / 1155 |
pancreas | 100% | 2199.28 | 328 / 328 | 98% | 12.81 | 175 / 178 |
uterus | 100% | 2926.52 | 170 / 170 | 96% | 17.25 | 442 / 459 |
thymus | 100% | 2204.54 | 652 / 653 | 96% | 14.23 | 583 / 605 |
bladder | 100% | 2531.10 | 21 / 21 | 95% | 13.26 | 477 / 504 |
kidney | 100% | 1603.92 | 89 / 89 | 94% | 13.62 | 846 / 901 |
adrenal gland | 100% | 2644.27 | 258 / 258 | 93% | 17.88 | 214 / 230 |
liver | 97% | 1042.25 | 220 / 226 | 78% | 7.39 | 316 / 406 |
adipose | 100% | 2366.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2717.85 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 4406.31 | 803 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 9767.27 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 3323.56 | 241 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 14.07 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 19.64 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 17.51 | 28 / 29 |
heart | 97% | 1881.40 | 831 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM53C |
Protein name | Protein FAM53C Family with sequence similarity 53 member C |
Synonyms | C5orf6 |
Description | |
Accessions | ENST00000511276.1 D6RHW3 ENST00000434981.6 Q9NYF3 ENST00000513056.5 ENST00000239906.10 D6RE00 |