Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 63% ± 21% | |
epithelial cell | 4 studies | 21% ± 6% | |
deuterosomal cell | 3 studies | 45% ± 5% | |
astrocyte | 3 studies | 24% ± 9% | |
fibroblast | 3 studies | 29% ± 9% | |
Mueller cell | 3 studies | 24% ± 9% | |
glutamatergic neuron | 3 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1994.55 | 2642 / 2642 | 100% | 55.71 | 704 / 705 |
thymus | 99% | 778.90 | 649 / 653 | 100% | 22.13 | 602 / 605 |
adrenal gland | 100% | 690.69 | 257 / 258 | 97% | 16.12 | 224 / 230 |
prostate | 100% | 662.18 | 244 / 245 | 97% | 11.25 | 489 / 502 |
ovary | 100% | 861.61 | 180 / 180 | 94% | 12.75 | 406 / 430 |
kidney | 99% | 748.15 | 88 / 89 | 95% | 19.06 | 854 / 901 |
breast | 99% | 576.41 | 455 / 459 | 93% | 12.29 | 1044 / 1118 |
uterus | 99% | 947.74 | 168 / 170 | 70% | 12.26 | 320 / 459 |
lung | 93% | 498.21 | 538 / 578 | 74% | 7.69 | 854 / 1155 |
skin | 64% | 298.45 | 1149 / 1809 | 93% | 12.50 | 437 / 472 |
bladder | 100% | 628.57 | 21 / 21 | 55% | 5.23 | 278 / 504 |
liver | 75% | 267.43 | 169 / 226 | 51% | 4.33 | 208 / 406 |
stomach | 89% | 505.77 | 321 / 359 | 29% | 2.70 | 83 / 286 |
pancreas | 23% | 64.05 | 77 / 328 | 91% | 9.93 | 162 / 178 |
esophagus | 70% | 455.04 | 1011 / 1445 | 37% | 2.41 | 67 / 183 |
blood vessel | 99% | 602.24 | 1323 / 1335 | 0% | 0 | 0 / 0 |
intestine | 72% | 453.68 | 700 / 966 | 26% | 2.15 | 139 / 527 |
adipose | 99% | 530.68 | 1187 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1255.53 | 843 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 12.36 | 75 / 80 |
tonsil | 0% | 0 | 0 / 0 | 58% | 3.90 | 26 / 45 |
muscle | 53% | 163.23 | 424 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 45% | 2.63 | 13 / 29 |
spleen | 23% | 59.76 | 55 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 1.54 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM229B |
Protein name | Protein FAM229B |
Synonyms | C6orf225 |
Description | |
Accessions | Q4G0N7 ENST00000368656.7 ENST00000604268.1 |