Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 28% ± 10% | |
astrocyte | 7 studies | 26% ± 9% | |
adipocyte | 6 studies | 20% ± 3% | |
oligodendrocyte | 6 studies | 21% ± 6% | |
glutamatergic neuron | 5 studies | 41% ± 20% | |
microglial cell | 5 studies | 23% ± 6% | |
GABAergic neuron | 5 studies | 35% ± 17% | |
fibroblast | 5 studies | 20% ± 2% | |
interneuron | 4 studies | 32% ± 18% | |
epithelial cell | 4 studies | 23% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 30% ± 8% | |
macrophage | 4 studies | 22% ± 5% | |
smooth muscle cell | 4 studies | 17% ± 2% | |
granule cell | 3 studies | 17% ± 1% | |
neuron | 3 studies | 25% ± 8% | |
endothelial cell of lymphatic vessel | 3 studies | 19% ± 2% | |
pericyte | 3 studies | 19% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 35% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6775.61 | 1445 / 1445 | 100% | 18.33 | 183 / 183 |
prostate | 100% | 12062.84 | 245 / 245 | 100% | 25.10 | 502 / 502 |
uterus | 100% | 11824.25 | 170 / 170 | 100% | 28.82 | 459 / 459 |
adrenal gland | 100% | 4797.71 | 258 / 258 | 99% | 22.98 | 228 / 230 |
breast | 100% | 9037.84 | 459 / 459 | 99% | 21.17 | 1106 / 1118 |
pancreas | 100% | 5664.93 | 328 / 328 | 99% | 25.83 | 176 / 178 |
thymus | 100% | 9681.01 | 653 / 653 | 99% | 23.29 | 597 / 605 |
skin | 100% | 7596.20 | 1804 / 1809 | 99% | 20.07 | 466 / 472 |
bladder | 100% | 7458.43 | 21 / 21 | 98% | 23.39 | 496 / 504 |
intestine | 100% | 8370.00 | 966 / 966 | 98% | 16.82 | 518 / 527 |
ovary | 100% | 10490.58 | 180 / 180 | 98% | 17.53 | 422 / 430 |
liver | 100% | 5652.90 | 226 / 226 | 97% | 15.99 | 393 / 406 |
lung | 100% | 10267.38 | 578 / 578 | 97% | 18.94 | 1118 / 1155 |
stomach | 100% | 5854.53 | 359 / 359 | 95% | 14.04 | 273 / 286 |
brain | 95% | 3752.44 | 2506 / 2642 | 100% | 27.31 | 704 / 705 |
kidney | 100% | 7621.98 | 89 / 89 | 94% | 23.98 | 851 / 901 |
adipose | 100% | 8007.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.81 | 29 / 29 |
spleen | 100% | 14993.15 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.97 | 1 / 1 |
blood vessel | 100% | 6950.83 | 1331 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 7544.67 | 921 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 3428.14 | 842 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 2982.13 | 774 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 16.11 | 77 / 80 |
tonsil | 0% | 0 | 0 / 0 | 96% | 23.09 | 43 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016607 | Cellular component | nuclear speck |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM193B |
Protein name | Protein FAM193B Family with sequence similarity 193 member B |
Synonyms | KIAA1931 IRIZIO |
Description | |
Accessions | ENST00000507212.1 D6REE6 D6RDZ2 ENST00000524677.6 [Q96PV7-1] ENST00000514747.6 [Q96PV7-3] H0Y9D3 ENST00000506955.5 H0YCX2 ENST00000502403.1 H0Y9J9 H0Y9W8 D6RAX9 ENST00000507587.1 ENST00000506432.1 ENST00000513282.5 ENST00000524677.5 ENST00000510479.5 Q96PV7 D6REQ2 D6RC29 ENST00000510163.5 H0Y9G1 ENST00000510429.1 |