Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 33 studies | 27% ± 9% | |
endothelial cell | 11 studies | 23% ± 4% | |
smooth muscle cell | 10 studies | 21% ± 5% | |
pericyte | 10 studies | 23% ± 11% | |
myofibroblast cell | 9 studies | 26% ± 8% | |
connective tissue cell | 8 studies | 34% ± 14% | |
epithelial cell | 7 studies | 33% ± 12% | |
club cell | 5 studies | 22% ± 8% | |
ionocyte | 5 studies | 34% ± 10% | |
secretory cell | 5 studies | 21% ± 6% | |
ciliated cell | 5 studies | 23% ± 4% | |
goblet cell | 5 studies | 41% ± 21% | |
respiratory goblet cell | 4 studies | 32% ± 9% | |
basal cell | 4 studies | 34% ± 8% | |
adventitial cell | 4 studies | 23% ± 6% | |
hepatocyte | 4 studies | 35% ± 13% | |
adipocyte | 4 studies | 23% ± 7% | |
oligodendrocyte | 4 studies | 22% ± 8% | |
mucus secreting cell | 3 studies | 33% ± 4% | |
abnormal cell | 3 studies | 28% ± 9% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 1% | |
microglial cell | 3 studies | 22% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3449.05 | 1445 / 1445 | 100% | 43.58 | 183 / 183 |
prostate | 100% | 4608.46 | 245 / 245 | 100% | 54.19 | 502 / 502 |
breast | 100% | 3208.79 | 459 / 459 | 100% | 67.82 | 1117 / 1118 |
uterus | 100% | 4062.95 | 170 / 170 | 100% | 41.15 | 458 / 459 |
liver | 100% | 3058.27 | 226 / 226 | 100% | 38.00 | 405 / 406 |
lung | 100% | 3598.91 | 577 / 578 | 100% | 51.86 | 1152 / 1155 |
stomach | 100% | 2585.19 | 359 / 359 | 99% | 35.22 | 283 / 286 |
intestine | 100% | 4272.91 | 966 / 966 | 99% | 34.55 | 520 / 527 |
ovary | 100% | 4660.05 | 180 / 180 | 99% | 32.05 | 424 / 430 |
pancreas | 99% | 1464.02 | 326 / 328 | 99% | 53.55 | 176 / 178 |
adrenal gland | 100% | 6139.07 | 258 / 258 | 98% | 46.98 | 226 / 230 |
bladder | 100% | 5244.19 | 21 / 21 | 98% | 39.04 | 495 / 504 |
kidney | 99% | 1498.67 | 88 / 89 | 94% | 29.46 | 845 / 901 |
skin | 100% | 4443.14 | 1808 / 1809 | 92% | 51.31 | 436 / 472 |
thymus | 100% | 2366.41 | 650 / 653 | 89% | 29.03 | 541 / 605 |
brain | 57% | 512.28 | 1502 / 2642 | 52% | 12.11 | 368 / 705 |
adipose | 100% | 3668.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 24.86 | 1 / 1 |
blood vessel | 100% | 4429.11 | 1333 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 39.93 | 44 / 45 |
heart | 96% | 1852.64 | 830 / 861 | 0% | 0 | 0 / 0 |
spleen | 96% | 1227.70 | 232 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 20.34 | 69 / 80 |
muscle | 74% | 724.75 | 595 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 8.05 | 19 / 29 |
peripheral blood | 5% | 42.75 | 48 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM114A1 |
Protein name | Family with sequence similarity 114 member A1 Protein NOXP20 (Nervous system overexpressed protein 20) (Protein FAM114A1) |
Synonyms | NOXP20 |
Description | FUNCTION: May play a role in neuronal cell development. . |
Accessions | ENST00000510213.5 ENST00000358869.5 [Q8IWE2-1] D6R9C9 ENST00000515037.5 [Q8IWE2-2] Q8IWE2 |