Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 23% ± 7% | |
epithelial cell | 7 studies | 24% ± 10% | |
glutamatergic neuron | 5 studies | 38% ± 18% | |
GABAergic neuron | 5 studies | 34% ± 14% | |
astrocyte | 5 studies | 25% ± 6% | |
microglial cell | 3 studies | 20% ± 1% | |
neuron | 3 studies | 23% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 5% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 1% | |
macrophage | 3 studies | 20% ± 7% | |
interneuron | 3 studies | 36% ± 17% | |
oligodendrocyte | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3225.43 | 245 / 245 | 99% | 9.66 | 499 / 502 |
thymus | 100% | 2821.24 | 653 / 653 | 99% | 9.36 | 600 / 605 |
brain | 99% | 1483.41 | 2618 / 2642 | 100% | 10.20 | 703 / 705 |
intestine | 100% | 2359.59 | 966 / 966 | 98% | 7.00 | 519 / 527 |
uterus | 100% | 2367.08 | 170 / 170 | 98% | 6.01 | 450 / 459 |
pancreas | 100% | 924.58 | 328 / 328 | 98% | 7.87 | 174 / 178 |
stomach | 100% | 1410.67 | 359 / 359 | 97% | 5.80 | 276 / 286 |
ovary | 100% | 2163.07 | 180 / 180 | 96% | 5.64 | 414 / 430 |
esophagus | 100% | 1950.78 | 1445 / 1445 | 96% | 4.97 | 176 / 183 |
bladder | 100% | 2246.57 | 21 / 21 | 96% | 5.79 | 483 / 504 |
kidney | 100% | 2418.06 | 89 / 89 | 95% | 6.32 | 855 / 901 |
breast | 100% | 2320.48 | 459 / 459 | 94% | 6.12 | 1054 / 1118 |
adrenal gland | 100% | 1315.67 | 258 / 258 | 94% | 5.68 | 216 / 230 |
lung | 100% | 1934.90 | 576 / 578 | 91% | 4.86 | 1056 / 1155 |
skin | 99% | 1226.82 | 1792 / 1809 | 88% | 3.76 | 414 / 472 |
liver | 93% | 725.92 | 210 / 226 | 84% | 3.96 | 341 / 406 |
adipose | 100% | 1858.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2891.17 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.90 | 1 / 1 |
blood vessel | 100% | 1647.77 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1010.73 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 964.10 | 853 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 8.26 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 96% | 4.05 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 72% | 3.02 | 21 / 29 |
peripheral blood | 51% | 289.86 | 473 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006139 | Biological process | nucleobase-containing compound metabolic process |
GO_0003676 | Molecular function | nucleic acid binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0008408 | Molecular function | 3'-5' exonuclease activity |
Gene name | EXD3 |
Protein name | Exonuclease mut-7 homolog (EC 3.1.-.-) (Exonuclease 3'-5' domain-containing protein 3) Exonuclease 3'-5' domain containing 3 |
Synonyms | HBE269 |
Description | FUNCTION: Possesses 3'-5' exoribonuclease activity. Required for 3'-end trimming of AGO1-bound miRNAs (By similarity). . |
Accessions | H0YD51 Q8N9H8 ENST00000478344.6 ENST00000465160.2 [Q8N9H8-5] ENST00000479452.5 [Q8N9H8-4] E9PI94 ENST00000340951.9 [Q8N9H8-1] E9PSB6 ENST00000491734.6 ENST00000460390.6 |