ESYT3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
type II pneumocyte	4 studies	19% ± 3%	Explore
GABAergic neuron	3 studies	28% ± 11%	Explore
glutamatergic neuron	3 studies	34% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	20% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	2311.05	652 / 653	83%	7.82	503 / 605
lung	98%	2351.73	565 / 578	67%	3.94	775 / 1155
uterus	79%	908.65	134 / 170	54%	2.10	249 / 459
stomach	72%	579.41	259 / 359	37%	0.83	105 / 286
brain	83%	841.57	2194 / 2642	19%	0.38	131 / 705
pancreas	50%	170.08	165 / 328	42%	0.72	75 / 178
skin	79%	1844.60	1426 / 1809	13%	0.31	60 / 472
intestine	66%	841.79	633 / 966	25%	0.81	133 / 527
ovary	37%	170.27	66 / 180	48%	0.90	205 / 430
bladder	52%	339.10	11 / 21	26%	0.78	129 / 504
kidney	38%	160.71	34 / 89	23%	0.57	205 / 901
esophagus	10%	37.31	151 / 1445	49%	1.43	90 / 183
breast	31%	121.60	142 / 459	22%	0.61	242 / 1118
tonsil	0%	0	0 / 0	44%	1.22	20 / 45
blood vessel	18%	62.34	237 / 1335	0%	0	0 / 0
muscle	16%	56.65	127 / 803	0%	0	0 / 0
heart	15%	41.11	128 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	14%	0.33	57 / 406
prostate	5%	14.28	13 / 245	4%	0.06	20 / 502
adrenal gland	2%	13.60	5 / 258	5%	0.09	11 / 230
adipose	3%	10.27	32 / 1204	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1