Name | Number of supported studies | Average coverage | |
---|---|---|---|
enterocyte | 6 studies | 34% ± 10% | |
retinal rod cell | 6 studies | 23% ± 6% | |
retinal cone cell | 5 studies | 24% ± 3% | |
Mueller cell | 4 studies | 43% ± 5% | |
brush cell | 4 studies | 29% ± 9% | |
ciliated cell | 3 studies | 17% ± 1% | |
epithelial cell | 3 studies | 30% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 6 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 4454.79 | 225 / 226 | 93% | 28.99 | 377 / 406 |
kidney | 100% | 3478.18 | 89 / 89 | 49% | 5.62 | 445 / 901 |
breast | 54% | 720.10 | 247 / 459 | 71% | 11.75 | 789 / 1118 |
esophagus | 39% | 856.77 | 557 / 1445 | 85% | 19.00 | 156 / 183 |
intestine | 44% | 1343.26 | 427 / 966 | 76% | 12.38 | 403 / 527 |
ovary | 1% | 2.11 | 1 / 180 | 96% | 37.27 | 411 / 430 |
skin | 72% | 3222.30 | 1302 / 1809 | 18% | 1.65 | 85 / 472 |
prostate | 70% | 734.22 | 172 / 245 | 19% | 1.38 | 96 / 502 |
tonsil | 0% | 0 | 0 / 0 | 89% | 17.12 | 40 / 45 |
uterus | 8% | 216.77 | 14 / 170 | 79% | 18.24 | 362 / 459 |
lung | 19% | 158.74 | 111 / 578 | 63% | 8.17 | 732 / 1155 |
stomach | 1% | 4.80 | 3 / 359 | 74% | 14.44 | 213 / 286 |
bladder | 0% | 0 | 0 / 21 | 58% | 8.91 | 291 / 504 |
pancreas | 0% | 0 | 0 / 328 | 46% | 4.88 | 81 / 178 |
adrenal gland | 36% | 294.78 | 92 / 258 | 2% | 0.41 | 4 / 230 |
thymus | 1% | 11.51 | 4 / 653 | 35% | 4.21 | 211 / 605 |
peripheral blood | 27% | 224.82 | 254 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 26% | 2.74 | 21 / 80 |
brain | 16% | 182.58 | 426 / 2642 | 1% | 0.38 | 10 / 705 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.38 | 1 / 29 |
spleen | 2% | 12.19 | 4 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 4.17 | 6 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.56 | 3 / 803 | 0% | 0 | 0 / 0 |
adipose | 0% | 4.23 | 4 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051017 | Biological process | actin filament bundle assembly |
GO_0007605 | Biological process | sensory perception of sound |
GO_0030034 | Biological process | microvillar actin bundle assembly |
GO_0005903 | Cellular component | brush border |
GO_0005902 | Cellular component | microvillus |
GO_0032420 | Cellular component | stereocilium |
GO_0031941 | Cellular component | filamentous actin |
GO_0032426 | Cellular component | stereocilium tip |
GO_0005737 | Cellular component | cytoplasm |
GO_0051015 | Molecular function | actin filament binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | ESPN |
Protein name | Espin (Autosomal recessive deafness type 36 protein) (Ectoplasmic specialization protein) Espin |
Synonyms | LP2654 DFNB36 |
Description | FUNCTION: Multifunctional actin-bundling protein. Plays a major role in regulating the organization, dimension, dynamics and signaling capacities of the actin filament-rich microvilli in the mechanosensory and chemosensory cells . Required for the assembly and stabilization of the stereociliary parallel actin bundles. Plays a crucial role in the formation and maintenance of inner ear hair cell stereocilia (By similarity). Involved in the elongation of actin in stereocilia . In extrastriolar hair cells, required for targeting MYO3B to stereocilia tips, and for regulation of stereocilia diameter and staircase formation. . |
Accessions | ENST00000477679.2 ENST00000633239.1 A0A1B0GUS9 A0A0J9YW00 ENST00000475479.2 A0A0J9YWQ8 A0A2R8Y6D3 A0A1B0GUN9 ENST00000461727.6 [B1AK53-2] Q5JYL1 A0A2R8Y7L7 ENST00000645284.1 [B1AK53-1] ENST00000478323.1 ENST00000636644.1 B1AK53 ENST00000475228.6 A0A2R8YG57 K7EMB7 ENST00000434576.2 A0A0J9YY76 ENST00000632593.1 ENST00000632803.1 ENST00000636330.1 ENST00000418286.1 H0Y7L4 |