Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 29 studies | 37% ± 18% | |
oligodendrocyte precursor cell | 11 studies | 36% ± 15% | |
ciliated cell | 9 studies | 30% ± 15% | |
pericyte | 8 studies | 30% ± 15% | |
adipocyte | 8 studies | 28% ± 11% | |
basal cell | 7 studies | 42% ± 25% | |
astrocyte | 6 studies | 30% ± 16% | |
epithelial cell | 6 studies | 39% ± 25% | |
retinal ganglion cell | 6 studies | 41% ± 23% | |
vein endothelial cell | 6 studies | 48% ± 23% | |
endothelial cell of lymphatic vessel | 6 studies | 36% ± 7% | |
oligodendrocyte | 6 studies | 25% ± 11% | |
GABAergic neuron | 5 studies | 28% ± 9% | |
capillary endothelial cell | 5 studies | 29% ± 9% | |
endothelial cell of artery | 5 studies | 31% ± 15% | |
fibroblast | 5 studies | 29% ± 10% | |
type I pneumocyte | 5 studies | 39% ± 11% | |
cardiac muscle cell | 4 studies | 23% ± 3% | |
mesothelial cell | 4 studies | 33% ± 8% | |
glutamatergic neuron | 4 studies | 38% ± 8% | |
club cell | 4 studies | 35% ± 13% | |
smooth muscle cell | 4 studies | 19% ± 3% | |
cholangiocyte | 3 studies | 45% ± 21% | |
endothelial cell of sinusoid | 3 studies | 28% ± 8% | |
interneuron | 3 studies | 32% ± 7% | |
neuron | 3 studies | 41% ± 12% | |
progenitor cell | 3 studies | 33% ± 16% | |
endocardial cell | 3 studies | 48% ± 19% | |
retinal rod cell | 3 studies | 33% ± 7% | |
endothelial cell of vascular tree | 3 studies | 47% ± 8% | |
retinal pigment epithelial cell | 3 studies | 49% ± 27% | |
respiratory goblet cell | 3 studies | 38% ± 14% | |
mucus secreting cell | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 876.00 | 89 / 89 | 97% | 7.95 | 872 / 901 |
thymus | 100% | 1420.29 | 653 / 653 | 92% | 4.95 | 557 / 605 |
pancreas | 95% | 302.03 | 310 / 328 | 88% | 2.96 | 156 / 178 |
ovary | 94% | 276.52 | 170 / 180 | 87% | 2.96 | 374 / 430 |
prostate | 100% | 632.61 | 245 / 245 | 80% | 2.69 | 403 / 502 |
breast | 100% | 1021.54 | 459 / 459 | 80% | 3.94 | 897 / 1118 |
lung | 100% | 902.00 | 578 / 578 | 72% | 1.86 | 828 / 1155 |
uterus | 100% | 478.96 | 170 / 170 | 72% | 2.11 | 329 / 459 |
esophagus | 100% | 746.79 | 1444 / 1445 | 71% | 2.08 | 130 / 183 |
brain | 89% | 221.23 | 2363 / 2642 | 77% | 1.74 | 544 / 705 |
bladder | 100% | 502.48 | 21 / 21 | 52% | 1.16 | 261 / 504 |
stomach | 98% | 428.11 | 353 / 359 | 40% | 0.93 | 114 / 286 |
adrenal gland | 100% | 375.45 | 257 / 258 | 32% | 0.70 | 73 / 230 |
intestine | 99% | 345.85 | 955 / 966 | 31% | 0.75 | 166 / 527 |
adipose | 100% | 1127.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 473.67 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 644.42 | 858 / 861 | 0% | 0 | 0 / 0 |
skin | 72% | 515.14 | 1304 / 1809 | 27% | 0.68 | 127 / 472 |
spleen | 99% | 370.89 | 238 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 71% | 2.51 | 32 / 45 |
muscle | 68% | 133.28 | 550 / 803 | 0% | 0 | 0 / 0 |
liver | 46% | 91.48 | 104 / 226 | 18% | 0.68 | 72 / 406 |
eye | 0% | 0 | 0 / 0 | 16% | 0.33 | 13 / 80 |
peripheral blood | 10% | 26.42 | 92 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.10 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0031032 | Biological process | actomyosin structure organization |
GO_0005575 | Cellular component | cellular_component |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0008092 | Molecular function | cytoskeletal protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | EPB41L4A |
Protein name | EPB41L4A protein (Erythrocyte membrane protein band 4.1 like 4A, isoform CRA_b) Band 4.1-like protein 4A (Erythrocyte membrane protein band 4.1-like 4A) (Protein NBL4) |
Synonyms | hCG_37240 EPB41L4 |
Description | |
Accessions | Q9HCS5 ENST00000261486.6 Q8NEH8 |