Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 31% ± 13% | |
retinal cone cell | 7 studies | 47% ± 19% | |
glutamatergic neuron | 7 studies | 38% ± 18% | |
microglial cell | 6 studies | 24% ± 6% | |
retinal rod cell | 6 studies | 43% ± 19% | |
ciliated cell | 6 studies | 24% ± 9% | |
oligodendrocyte | 6 studies | 24% ± 8% | |
capillary endothelial cell | 5 studies | 29% ± 6% | |
retinal ganglion cell | 5 studies | 37% ± 17% | |
astrocyte | 4 studies | 24% ± 10% | |
glomerular endothelial cell | 3 studies | 26% ± 7% | |
neuron | 3 studies | 27% ± 7% | |
endothelial cell of vascular tree | 3 studies | 23% ± 5% | |
GABAergic neuron | 3 studies | 40% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 1386.47 | 89 / 89 | 96% | 11.78 | 865 / 901 |
prostate | 97% | 1396.96 | 238 / 245 | 98% | 7.74 | 492 / 502 |
breast | 100% | 2003.14 | 458 / 459 | 93% | 7.20 | 1037 / 1118 |
adrenal gland | 96% | 1149.52 | 248 / 258 | 94% | 9.80 | 216 / 230 |
thymus | 100% | 2361.11 | 652 / 653 | 86% | 6.67 | 518 / 605 |
esophagus | 98% | 4367.13 | 1417 / 1445 | 86% | 7.22 | 157 / 183 |
pancreas | 93% | 761.77 | 306 / 328 | 90% | 6.14 | 161 / 178 |
lung | 99% | 2310.22 | 575 / 578 | 83% | 6.88 | 959 / 1155 |
brain | 83% | 1408.26 | 2182 / 2642 | 100% | 10.40 | 702 / 705 |
stomach | 95% | 2646.87 | 341 / 359 | 72% | 5.36 | 205 / 286 |
bladder | 100% | 3104.71 | 21 / 21 | 63% | 3.77 | 317 / 504 |
uterus | 100% | 2634.41 | 170 / 170 | 62% | 4.71 | 284 / 459 |
ovary | 74% | 582.35 | 133 / 180 | 88% | 5.68 | 378 / 430 |
intestine | 97% | 4655.05 | 933 / 966 | 59% | 3.27 | 313 / 527 |
skin | 99% | 1668.88 | 1792 / 1809 | 45% | 2.85 | 211 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.30 | 1 / 1 |
adipose | 100% | 2651.40 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2362.96 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1702.15 | 849 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 1210.37 | 756 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 64% | 3.50 | 29 / 45 |
spleen | 59% | 431.10 | 143 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 54% | 2.46 | 43 / 80 |
liver | 19% | 113.03 | 43 / 226 | 33% | 1.44 | 135 / 406 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.75 | 5 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007420 | Biological process | brain development |
GO_0002244 | Biological process | hematopoietic progenitor cell differentiation |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0007052 | Biological process | mitotic spindle organization |
GO_0007405 | Biological process | neuroblast proliferation |
GO_0097431 | Cellular component | mitotic spindle pole |
GO_1990023 | Cellular component | mitotic spindle midzone |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005875 | Cellular component | microtubule associated complex |
GO_0005874 | Cellular component | microtubule |
GO_0072686 | Cellular component | mitotic spindle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0015631 | Molecular function | tubulin binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | EML1 |
Protein name | Echinoderm microtubule-associated protein-like 1 (EMAP-1) (HuEMAP-1) EMAP like 1 |
Synonyms | EMAPL1 EMAPL EMAP1 |
Description | FUNCTION: Modulates the assembly and organization of the microtubule cytoskeleton, and probably plays a role in regulating the orientation of the mitotic spindle and the orientation of the plane of cell division. Required for normal proliferation of neuronal progenitor cells in the developing brain and for normal brain development. Does not affect neuron migration per se. . |
Accessions | ENST00000556199.1 ENST00000556714.5 ENST00000554479.5 H0YJY3 ENST00000557313.5 ENST00000697131.1 G3V5C8 O00423 ENST00000554386.1 A0A3B3IU69 ENST00000555145.5 G3V497 ENST00000553720.5 ENST00000649352.1 G3V4H6 G3V4U5 ENST00000556835.5 G3V500 A0A8V8TKR4 ENST00000557741.1 G3V3N9 ENST00000327921.13 ENST00000334192.8 [O00423-3] H0YJS9 ENST00000555096.5 G3V538 G3V3J1 H0YJD8 F8W717 ENST00000556947.1 H0YJK4 ENST00000262233.11 [O00423-1] ENST00000554553.5 |