EGFLAM | OmnibusX

Name	Number of supported studies	Average coverage
eye	4 studies	30% ± 13%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3505.41	458 / 459	99%	6.12	1103 / 1118
prostate	99%	1348.62	242 / 245	94%	4.15	474 / 502
ovary	100%	2390.19	180 / 180	93%	5.50	399 / 430
thymus	98%	808.92	637 / 653	94%	7.57	568 / 605
uterus	94%	723.82	160 / 170	80%	4.78	369 / 459
adrenal gland	84%	790.97	217 / 258	76%	45.95	174 / 230
bladder	71%	473.67	15 / 21	86%	3.02	432 / 504
esophagus	69%	682.39	1001 / 1445	81%	2.62	148 / 183
skin	67%	391.66	1204 / 1809	81%	5.09	381 / 472
intestine	72%	479.48	697 / 966	72%	1.97	381 / 527
kidney	66%	413.06	59 / 89	72%	5.01	645 / 901
lung	33%	153.29	189 / 578	84%	3.06	970 / 1155
stomach	34%	210.46	121 / 359	78%	2.13	222 / 286
adipose	100%	2809.82	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	2.91	29 / 29
muscle	100%	2956.77	803 / 803	0%	0	0 / 0
blood vessel	98%	1059.44	1305 / 1335	0%	0	0 / 0
spleen	97%	760.11	233 / 241	0%	0	0 / 0
liver	31%	137.95	69 / 226	65%	1.41	265 / 406
pancreas	2%	4.85	5 / 328	92%	4.04	163 / 178
tonsil	0%	0	0 / 0	91%	4.74	41 / 45
heart	77%	918.37	663 / 861	0%	0	0 / 0
brain	11%	50.82	280 / 2642	66%	2.35	462 / 705
eye	0%	0	0 / 0	19%	0.87	15 / 80
peripheral blood	0%	0.33	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0030198	Biological process	extracellular matrix organization
GO_0010811	Biological process	positive regulation of cell-substrate adhesion
GO_0042995	Cellular component	cell projection
GO_0043083	Cellular component	synaptic cleft
GO_0005604	Cellular component	basement membrane
GO_0048786	Cellular component	presynaptic active zone
GO_0098684	Cellular component	photoreceptor ribbon synapse
GO_0005614	Cellular component	interstitial matrix
GO_0005509	Molecular function	calcium ion binding
GO_0005515	Molecular function	protein binding
GO_0005539	Molecular function	glycosaminoglycan binding

Gene name	EGFLAM
Protein name	Pikachurin (Agrin-like protein) (EGF-like, fibronectin type-III and laminin G-like domain-containing protein) EGF like, fibronectin type III and laminin G domains
Synonyms	AGRNL PIKA AGRINL
Description	FUNCTION: Involved in both the retinal photoreceptor ribbon synapse formation and physiological functions of visual perception. Plays a key role in the synaptic organization of photoreceptors by mediating transsynaptic interaction between alpha-dystroglycan and GPR179 on the postsynaptic membrane. Necessary for proper bipolar dendritic tip apposition to the photoreceptor ribbon synapse. Promotes matrix assembly and cell adhesiveness. .
Accessions	ENST00000508131.5 ENST00000354891.7 [Q63HQ2-1] ENST00000504709.1 ENST00000322350.10 [Q63HQ2-2] Q63HQ2 D6RG24 D6RJD2 ENST00000397202.6 [Q63HQ2-3] ENST00000336740.10 [Q63HQ2-4] ENST00000506135.5 [Q63HQ2-5] ENST00000514476.1 [Q63HQ2-5] ENST00000397210.7 [Q63HQ2-5]

EGFLAM report