Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney loop of Henle epithelial cell | 6 studies | 20% ± 3% | |
plasmablast | 5 studies | 35% ± 17% | |
epithelial cell | 5 studies | 42% ± 17% | |
CD8-positive, alpha-beta T cell | 5 studies | 22% ± 5% | |
hematopoietic precursor cell | 4 studies | 26% ± 10% | |
CD4-positive, alpha-beta T cell | 4 studies | 23% ± 8% | |
erythroblast | 4 studies | 41% ± 16% | |
endothelial cell | 4 studies | 26% ± 7% | |
ciliated cell | 4 studies | 35% ± 6% | |
pancreatic A cell | 3 studies | 24% ± 4% | |
conventional dendritic cell | 3 studies | 36% ± 13% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 23% ± 3% | |
erythrocyte | 3 studies | 33% ± 12% | |
B cell | 3 studies | 21% ± 4% | |
dendritic cell | 3 studies | 33% ± 16% | |
intestinal crypt stem cell | 3 studies | 20% ± 4% | |
basal cell | 3 studies | 33% ± 12% | |
natural killer cell | 3 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 623.03 | 1444 / 1445 | 100% | 14.05 | 183 / 183 |
bladder | 100% | 602.90 | 21 / 21 | 100% | 12.83 | 503 / 504 |
brain | 100% | 872.07 | 2636 / 2642 | 100% | 9.58 | 705 / 705 |
ovary | 100% | 544.51 | 180 / 180 | 100% | 15.64 | 429 / 430 |
stomach | 100% | 694.29 | 359 / 359 | 100% | 13.14 | 285 / 286 |
prostate | 100% | 633.34 | 245 / 245 | 100% | 11.33 | 500 / 502 |
breast | 100% | 610.21 | 459 / 459 | 100% | 9.27 | 1113 / 1118 |
pancreas | 100% | 630.01 | 328 / 328 | 99% | 7.90 | 177 / 178 |
uterus | 99% | 548.91 | 169 / 170 | 100% | 12.59 | 458 / 459 |
thymus | 100% | 545.33 | 651 / 653 | 99% | 7.65 | 600 / 605 |
intestine | 100% | 513.32 | 965 / 966 | 99% | 11.90 | 521 / 527 |
lung | 99% | 552.74 | 571 / 578 | 100% | 9.99 | 1154 / 1155 |
adrenal gland | 100% | 1164.55 | 258 / 258 | 99% | 11.15 | 227 / 230 |
kidney | 100% | 1193.92 | 89 / 89 | 98% | 10.37 | 885 / 901 |
skin | 98% | 727.92 | 1780 / 1809 | 97% | 10.58 | 460 / 472 |
liver | 99% | 443.43 | 223 / 226 | 92% | 6.71 | 372 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.25 | 29 / 29 |
spleen | 100% | 632.25 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 25.48 | 1 / 1 |
adipose | 100% | 520.12 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 721.96 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 440.27 | 791 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 6.54 | 76 / 80 |
heart | 94% | 430.57 | 811 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 33% | 427.71 | 308 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_1990830 | Biological process | cellular response to leukemia inhibitory factor |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_2001235 | Biological process | positive regulation of apoptotic signaling pathway |
GO_2000774 | Biological process | positive regulation of cellular senescence |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0043517 | Biological process | positive regulation of DNA damage response, signal transduction by p53 class mediator |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0017101 | Cellular component | aminoacyl-tRNA synthetase multienzyme complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | EEF1E1 |
Protein name | Eukaryotic translation elongation factor 1 epsilon-1 (Aminoacyl tRNA synthetase complex-interacting multifunctional protein 3) (Elongation factor p18) (Multisynthase complex auxiliary component p18) Eukaryotic translation elongation factor 1 epsilon 1 Eukaryotic translation elongation factor 1 epsilon 1 (HCG15559, isoform CRA_d) |
Synonyms | hCG_15559 P18 AIMP3 |
Description | FUNCTION: Positive modulator of ATM response to DNA damage. . |
Accessions | ENST00000502429.5 D6RBD7 H0YAL7 H0YAH9 ENST00000429723.6 [O43324-2] O43324 D6RCQ0 ENST00000379715.10 [O43324-1] ENST00000515633.1 ENST00000488226.2 ENST00000507463.1 |