Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 35% ± 15% | |
B cell | 4 studies | 22% ± 4% | |
ciliated cell | 4 studies | 25% ± 5% | |
basal cell | 4 studies | 24% ± 7% | |
goblet cell | 4 studies | 19% ± 1% | |
natural killer cell | 3 studies | 23% ± 7% | |
endothelial cell | 3 studies | 18% ± 3% | |
enteroendocrine cell | 3 studies | 19% ± 3% | |
intestinal crypt stem cell | 3 studies | 23% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5453.13 | 1445 / 1445 | 100% | 48.95 | 183 / 183 |
liver | 100% | 6451.26 | 226 / 226 | 100% | 65.66 | 406 / 406 |
pancreas | 100% | 5629.67 | 328 / 328 | 100% | 46.68 | 178 / 178 |
thymus | 100% | 6471.58 | 653 / 653 | 100% | 49.09 | 605 / 605 |
uterus | 100% | 5208.32 | 170 / 170 | 100% | 64.62 | 459 / 459 |
ovary | 100% | 4839.38 | 180 / 180 | 100% | 46.71 | 429 / 430 |
intestine | 100% | 6044.05 | 966 / 966 | 100% | 79.99 | 525 / 527 |
prostate | 100% | 7976.80 | 245 / 245 | 100% | 110.15 | 500 / 502 |
skin | 100% | 6108.14 | 1809 / 1809 | 99% | 54.93 | 469 / 472 |
stomach | 100% | 5994.69 | 359 / 359 | 99% | 69.73 | 284 / 286 |
lung | 100% | 5286.31 | 578 / 578 | 99% | 58.67 | 1144 / 1155 |
bladder | 100% | 5466.81 | 21 / 21 | 99% | 84.23 | 499 / 504 |
breast | 100% | 5845.47 | 459 / 459 | 99% | 57.49 | 1105 / 1118 |
adrenal gland | 100% | 5161.59 | 258 / 258 | 99% | 33.19 | 227 / 230 |
kidney | 100% | 5234.18 | 89 / 89 | 99% | 37.75 | 888 / 901 |
brain | 99% | 3196.86 | 2607 / 2642 | 97% | 26.79 | 685 / 705 |
adipose | 100% | 5110.00 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 57.41 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 78.50 | 29 / 29 |
muscle | 100% | 5443.85 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 8220.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 49.28 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 70.19 | 1 / 1 |
blood vessel | 100% | 3603.43 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3448.59 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3449.52 | 907 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002943 | Biological process | tRNA dihydrouridine synthesis |
GO_0102263 | Molecular function | tRNA-dihydrouridine17 synthase activity |
GO_0102262 | Molecular function | tRNA-dihydrouridine16 synthase activity |
GO_0017150 | Molecular function | tRNA dihydrouridine synthase activity |
GO_0050660 | Molecular function | flavin adenine dinucleotide binding |
GO_0005515 | Molecular function | protein binding |
Gene name | DUS1L |
Protein name | Dihydrouridine synthase 1 like DUS1L protein tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like (EC 1.3.1.88) (tRNA-dihydrouridine synthase 1-like) tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] (EC 1.3.1.88) |
Synonyms | |
Description | FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . FUNCTION: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. . |
Accessions | ENST00000538833.6 J3QQZ0 J3QLE4 ENST00000306796.10 ENST00000542088.2 Q6P1R4 ENST00000354321.11 F5H0Q0 J3QKP9 ENST00000577907.1 ENST00000578907.5 J3KT57 J3QQL9 H0YGW8 ENST00000580731.1 Q9BTJ3 J3KSK2 ENST00000577574.5 ENST00000578176.5 ENST00000582529.5 |