Name | Number of supported studies | Average coverage | |
---|---|---|---|
basal cell | 5 studies | 38% ± 21% | |
keratinocyte | 5 studies | 59% ± 19% | |
hillock cell | 3 studies | 26% ± 3% | |
epithelial cell | 3 studies | 33% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
skin | 4 studies | 27% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 38% | 10292.56 | 556 / 1445 | 62% | 246.67 | 114 / 183 |
tonsil | 0% | 0 | 0 / 0 | 98% | 326.33 | 44 / 45 |
skin | 72% | 39416.50 | 1305 / 1809 | 10% | 8.73 | 47 / 472 |
uterus | 1% | 289.84 | 2 / 170 | 58% | 171.61 | 264 / 459 |
prostate | 19% | 680.22 | 46 / 245 | 28% | 5.76 | 142 / 502 |
bladder | 5% | 109.10 | 1 / 21 | 38% | 47.42 | 190 / 504 |
breast | 16% | 520.75 | 74 / 459 | 24% | 12.79 | 273 / 1118 |
lung | 1% | 17.99 | 3 / 578 | 39% | 68.00 | 449 / 1155 |
intestine | 0% | 0 | 0 / 966 | 18% | 8.14 | 94 / 527 |
thymus | 0% | 3.53 | 1 / 653 | 17% | 6.21 | 101 / 605 |
adipose | 14% | 619.37 | 174 / 1204 | 0% | 0 | 0 / 0 |
stomach | 1% | 34.32 | 3 / 359 | 10% | 2.96 | 30 / 286 |
ovary | 1% | 12.26 | 1 / 180 | 10% | 3.23 | 43 / 430 |
pancreas | 0% | 0 | 0 / 328 | 9% | 5.86 | 16 / 178 |
blood vessel | 4% | 171.93 | 56 / 1335 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 0.41 | 5 / 406 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.11 | 4 / 901 |
peripheral blood | 0% | 13.93 | 4 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 5.17 | 1 / 803 | 0% | 0 | 0 / 0 |
brain | 0% | 1.30 | 1 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0001701 | Biological process | in utero embryonic development |
GO_0001533 | Cellular component | cornified envelope |
GO_0005911 | Cellular component | cell-cell junction |
GO_0030054 | Cellular component | cell junction |
GO_0030057 | Cellular component | desmosome |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005509 | Molecular function | calcium ion binding |
GO_0045295 | Molecular function | gamma-catenin binding |
Gene name | DSC3 |
Protein name | Desmocollin-3 (Cadherin family member 3) (Desmocollin-4) (HT-CP) Desmocollin 3 |
Synonyms | DSC4 CDHF3 |
Description | FUNCTION: Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. May contribute to epidermal cell positioning (stratification) by mediating differential adhesiveness between cells that express different isoforms. |
Accessions | ENST00000360428.9 [Q14574-1] ENST00000434452.5 [Q14574-2] Q14574 J3QRL9 ENST00000584980.1 Q9HAX1 |