Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 40% ± 23% | |
myeloid cell | 6 studies | 27% ± 20% | |
goblet cell | 6 studies | 37% ± 19% | |
B cell | 5 studies | 20% ± 3% | |
GABAergic neuron | 5 studies | 38% ± 17% | |
microglial cell | 5 studies | 23% ± 8% | |
macrophage | 5 studies | 32% ± 5% | |
interneuron | 4 studies | 38% ± 19% | |
naive B cell | 3 studies | 17% ± 1% | |
epithelial cell | 3 studies | 29% ± 4% | |
dendritic cell | 3 studies | 18% ± 2% | |
alveolar macrophage | 3 studies | 25% ± 7% | |
monocyte | 3 studies | 23% ± 6% | |
granule cell | 3 studies | 27% ± 7% | |
mucus secreting cell | 3 studies | 25% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 34% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2518.00 | 245 / 245 | 100% | 52.37 | 502 / 502 |
intestine | 100% | 2104.77 | 966 / 966 | 99% | 21.35 | 522 / 527 |
stomach | 100% | 2510.73 | 359 / 359 | 99% | 20.26 | 283 / 286 |
breast | 100% | 1170.61 | 457 / 459 | 99% | 36.20 | 1110 / 1118 |
lung | 99% | 1231.13 | 575 / 578 | 98% | 15.78 | 1137 / 1155 |
esophagus | 100% | 1761.21 | 1439 / 1445 | 98% | 21.73 | 179 / 183 |
thymus | 100% | 1075.78 | 651 / 653 | 95% | 13.56 | 577 / 605 |
bladder | 100% | 1062.14 | 21 / 21 | 94% | 16.18 | 475 / 504 |
skin | 100% | 1912.34 | 1808 / 1809 | 94% | 11.49 | 442 / 472 |
kidney | 98% | 927.27 | 87 / 89 | 92% | 12.72 | 826 / 901 |
brain | 93% | 1965.88 | 2458 / 2642 | 96% | 9.55 | 678 / 705 |
uterus | 98% | 787.18 | 167 / 170 | 91% | 12.78 | 417 / 459 |
pancreas | 89% | 563.06 | 291 / 328 | 97% | 15.82 | 173 / 178 |
ovary | 89% | 506.48 | 161 / 180 | 81% | 7.55 | 347 / 430 |
liver | 89% | 1021.75 | 202 / 226 | 71% | 8.33 | 290 / 406 |
adrenal gland | 87% | 520.24 | 224 / 258 | 46% | 3.57 | 105 / 230 |
muscle | 100% | 1759.77 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1504.41 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.29 | 1 / 1 |
adipose | 99% | 1081.05 | 1196 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 933.26 | 1319 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.03 | 43 / 45 |
peripheral blood | 94% | 1119.60 | 871 / 929 | 0% | 0 | 0 / 0 |
heart | 86% | 717.99 | 744 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 7.64 | 18 / 29 |
eye | 0% | 0 | 0 / 0 | 51% | 3.04 | 41 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0050890 | Biological process | cognition |
GO_0015031 | Biological process | protein transport |
GO_0009880 | Biological process | embryonic pattern specification |
GO_0006895 | Biological process | Golgi to endosome transport |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0031901 | Cellular component | early endosome membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005768 | Cellular component | endosome |
GO_0005829 | Cellular component | cytosol |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | DOP1B |
Protein name | DOP1 leucine zipper like protein B Protein dopey-2 |
Synonyms | KIAA0933 C21orf5 DOPEY2 |
Description | FUNCTION: May play a role in regulating membrane trafficking of cargo proteins. Together with ATP9A and MON2, regulates SNX3 retromer-mediated endosomal sorting of WLS away from lysosomal degradation. . |
Accessions | A0A8I5KUN1 ENST00000399151.3 [Q9Y3R5-1] ENST00000693273.1 ENST00000691173.1 [Q9Y3R5-1] A0A8I5KWI7 ENST00000685394.1 Q9Y3R5 |