Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 39% ± 13% | |
deuterosomal cell | 4 studies | 21% ± 2% | |
epithelial cell | 3 studies | 26% ± 6% | |
GABAergic neuron | 3 studies | 31% ± 5% | |
glutamatergic neuron | 3 studies | 46% ± 6% | |
astrocyte | 3 studies | 23% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2007.54 | 2642 / 2642 | 100% | 13.43 | 705 / 705 |
prostate | 100% | 1111.32 | 245 / 245 | 100% | 9.57 | 500 / 502 |
thymus | 100% | 1636.22 | 653 / 653 | 99% | 8.28 | 598 / 605 |
kidney | 100% | 1265.17 | 89 / 89 | 98% | 9.20 | 884 / 901 |
lung | 99% | 1000.25 | 575 / 578 | 98% | 6.01 | 1136 / 1155 |
breast | 100% | 856.08 | 459 / 459 | 97% | 9.46 | 1087 / 1118 |
adrenal gland | 100% | 1037.33 | 258 / 258 | 96% | 6.49 | 221 / 230 |
ovary | 100% | 1059.26 | 180 / 180 | 96% | 5.06 | 413 / 430 |
uterus | 100% | 1217.91 | 170 / 170 | 93% | 5.34 | 429 / 459 |
pancreas | 95% | 441.27 | 312 / 328 | 98% | 6.37 | 174 / 178 |
bladder | 100% | 896.24 | 21 / 21 | 92% | 4.63 | 466 / 504 |
esophagus | 98% | 779.30 | 1413 / 1445 | 92% | 4.51 | 169 / 183 |
intestine | 99% | 795.43 | 957 / 966 | 91% | 3.77 | 477 / 527 |
stomach | 99% | 630.05 | 355 / 359 | 90% | 3.72 | 257 / 286 |
skin | 80% | 413.09 | 1453 / 1809 | 87% | 4.54 | 411 / 472 |
adipose | 100% | 853.66 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 646.70 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.74 | 1 / 1 |
blood vessel | 100% | 944.73 | 1333 / 1335 | 0% | 0 | 0 / 0 |
liver | 73% | 226.01 | 164 / 226 | 27% | 1.11 | 108 / 406 |
heart | 96% | 603.58 | 823 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 4.48 | 41 / 45 |
muscle | 81% | 308.68 | 653 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 1.99 | 20 / 29 |
eye | 0% | 0 | 0 / 0 | 69% | 2.85 | 55 / 80 |
peripheral blood | 21% | 116.26 | 199 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0036158 | Biological process | outer dynein arm assembly |
GO_0036157 | Cellular component | outer dynein arm |
GO_0005874 | Cellular component | microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0045504 | Molecular function | dynein heavy chain binding |
Gene name | DNAL1 |
Protein name | Dynein axonemal light chain 1 Dynein axonemal light chain 1 (LC1) |
Synonyms | C14orf168 |
Description | FUNCTION: Part of the multisubunit axonemal ATPase complexes that generate the force for cilia motility and govern beat frequency (By similarity). Component of the outer arm dynein (ODA). May be involved in a mechanosensory feedback mechanism controlling ODA activity based on external conformational cues by tethering the outer arm dynein heavy chain (DNAH5) to the microtubule within the axoneme (By similarity). Important for ciliary function in the airways and for the function of the cilia that produce the nodal flow essential for the determination of the left-right asymmetry . . |
Accessions | ENST00000554113.5 ENST00000554339.5 ENST00000311089.7 [Q4LDG9-2] ENST00000554159.1 ENST00000555919.7 G3V389 ENST00000553645.7 [Q4LDG9-1] G3V424 ENST00000555631.6 H0YJD6 H0YM28 ENST00000559993.1 G3V5I4 G3V2M0 Q4LDG9 ENST00000554871.5 [Q4LDG9-3] |